Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- plasma membrane 3
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67799 | Canola | plasma membrane | 95.91 | 95.91 |
| Bra003379.1-P | Field mustard | plastid | 95.91 | 94.85 |
| CDX98378 | Canola | plasma membrane | 94.8 | 94.8 |
| CDY00621 | Canola | plastid | 91.82 | 93.92 |
| CDX89024 | Canola | plasma membrane | 91.82 | 92.86 |
| Bra014538.1-P | Field mustard | plastid | 91.08 | 92.11 |
| AT1G30890.1 | Thale cress | cytosol, plasma membrane, plastid | 86.99 | 86.99 |
| KRH18296 | Soybean | endoplasmic reticulum | 81.78 | 81.78 |
| KRG93809 | Soybean | plastid | 81.04 | 81.04 |
| PGSC0003DMT400051743 | Potato | plastid | 80.3 | 80.3 |
| PGSC0003DMT400048758 | Potato | plastid | 79.55 | 80.15 |
| KRH45179 | Soybean | plastid | 80.3 | 79.12 |
| Bra007455.1-P | Field mustard | cytosol, golgi, mitochondrion, plasma membrane | 52.04 | 75.27 |
| CDX71903 | Canola | plastid | 46.84 | 74.12 |
| Solyc06g083630.2.1 | Tomato | plastid | 80.3 | 73.72 |
| GSMUA_Achr5P15070_001 | Banana | cytosol, plasma membrane, plastid | 71.75 | 72.01 |
| GSMUA_Achr4P22340_001 | Banana | cytosol, plasma membrane, plastid | 69.52 | 70.04 |
| CDY05995 | Canola | plasma membrane | 47.21 | 69.78 |
| VIT_05s0102g00730.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 84.76 | 67.66 |
| KXG24074 | Sorghum | plasma membrane | 66.91 | 67.42 |
| TraesCS6D01G156600.1 | Wheat | cytosol, plasma membrane, plastid | 66.54 | 67.04 |
| TraesCS6A01G167600.1 | Wheat | cytosol, plasma membrane, plastid | 66.54 | 67.04 |
| HORVU6Hr1G034030.2 | Barley | cytosol, plasma membrane, plastid | 66.54 | 67.04 |
| TraesCS6B01G195300.1 | Wheat | cytosol, plasma membrane, plastid | 66.17 | 66.67 |
| TraesCS2D01G001300.1 | Wheat | plasma membrane | 62.45 | 65.88 |
| TraesCS2A01G001100.1 | Wheat | plasma membrane | 62.45 | 65.88 |
| Zm00001d041267_P001 | Maize | cytosol, plasma membrane, plastid, vacuole | 65.06 | 65.54 |
| Os06t0620600-01 | Rice | cytosol, plasma membrane, plastid | 65.06 | 65.54 |
| Os04t0165400-01 | Rice | cytosol | 68.03 | 65.36 |
| EES04687 | Sorghum | cytosol, plasma membrane, plastid | 64.68 | 65.17 |
| TraesCS2B01G022800.1 | Wheat | plasma membrane | 65.06 | 65.06 |
| TraesCS7A01G400200.1 | Wheat | plasma membrane | 64.31 | 64.79 |
| TraesCS7B01G300300.1 | Wheat | plasma membrane | 64.31 | 64.79 |
| Zm00001d012393_P004 | Maize | extracellular | 64.68 | 64.44 |
| TraesCS7D01G394000.1 | Wheat | plasma membrane | 63.94 | 64.42 |
| TraesCS2D01G595700.1 | Wheat | plasma membrane | 57.62 | 64.05 |
| EER93147 | Sorghum | cytosol, plasma membrane, plastid | 63.57 | 64.04 |
| Solyc09g063020.2.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 79.55 | 62.21 |
| HORVU1Hr1G028870.1 | Barley | plastid | 34.2 | 59.74 |
| HORVU7Hr1G094050.2 | Barley | cytosol | 27.88 | 56.82 |
| KRH01468 | Soybean | plasma membrane | 79.55 | 54.73 |
| Zm00001d053686_P001 | Maize | cytosol | 64.68 | 52.89 |
| HORVU7Hr1G094010.8 | Barley | mitochondrion | 64.68 | 51.33 |
Protein Annotations
| MapMan:35.2 | EntrezGene:825119 | UniProt:A0A178VKV0 | ProteinID:AEE79933.1 | ProteinID:ANM64769.1 | ArrayExpress:AT3G59500 |
| EnsemblPlantsGene:AT3G59500 | RefSeq:AT3G59500 | TAIR:AT3G59500 | RefSeq:AT3G59500-TAIR-G | EnsemblPlants:AT3G59500.1 | TAIR:AT3G59500.1 |
| Unigene:At.34625 | UniProt:F4J8C0 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005793 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006888 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030134 | GO:GO:0030173 | EMBL:JQ937234 |
| RefSeq:NP_001326775.1 | RefSeq:NP_191509.2 | ProteinID:OAP06997.1 | PFAM:PF03878 | PO:PO:0000293 | PO:PO:0005052 |
| PANTHER:PTHR14083 | PANTHER:PTHR14083:SF6 | TMHMM:TMhelix | UniParc:UPI0000197063 | InterPro:Yif1_fam | SEG:seg |
Description
HRF1 protein [Source:UniProtKB/TrEMBL;Acc:F4J8C0]
Coordinates
chr3:+:21986463..21988326
Molecular Weight (calculated)
30176.1 Da
IEP (calculated)
9.510
GRAVY (calculated)
0.299
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MYNNMGPRPG MAMPQANPQP SPFGNPFSGP GSGLIRSGLG AYGEKIFGSS SEYVQSNISR YFSDPQYYFQ VNDQYVRNKL KIVLLPFLHR GHWTRISEPV
101: GGRLSYKPPI YDINAPDLYI PLMAFGTYVV LAGLSLGLYG KFTPEALNWL FVKGMVGWFL QVMLLKITLL SLGSGEAPLL DIVAYAGYTF TGLCLAVLGK
201: IIWGYSYYVL IPWTCLCTGV FLVKTMKRVL FAESRSYDSS RHHYLLIFVA LAQFPLLIWL GNISVNWLF
101: GGRLSYKPPI YDINAPDLYI PLMAFGTYVV LAGLSLGLYG KFTPEALNWL FVKGMVGWFL QVMLLKITLL SLGSGEAPLL DIVAYAGYTF TGLCLAVLGK
201: IIWGYSYYVL IPWTCLCTGV FLVKTMKRVL FAESRSYDSS RHHYLLIFVA LAQFPLLIWL GNISVNWLF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.