CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039542.1-P	Field mustard	plastid	99.63	99.63
CDY22740	Canola	plastid	85.13	85.77
CDY54970	Canola	plastid	81.78	82.71
AT4G15510.1	Thale cress	plastid	78.81	73.87
Os07t0275901-00	Rice	cytosol	20.07	71.05
VIT_14s0060g00850.t01	Wine grape	plastid	61.34	66.53
KRH68425	Soybean	nucleus, plastid	62.83	65.5
Os12t0564400-01	Rice	plasma membrane	57.99	62.65
GSMUA_Achr3P12740_001	Banana	plastid	59.48	62.26
Os07t0275100-00	Rice	endoplasmic reticulum, golgi, vacuole	57.62	60.78
Os07t0275801-00	Rice	cytosol, mitochondrion, plastid	17.84	60.0
KRG96702	Soybean	cytosol	42.75	59.59
PGSC0003DMT400027723	Potato	cytosol	62.83	58.88
Solyc01g106090.2.1	Tomato	plastid	62.83	58.88
OQU79328	Sorghum	endoplasmic reticulum, plastid	55.76	56.6
TraesCS5A01G087200.1	Wheat	plastid	56.51	54.68
TraesCS5B01G093100.1	Wheat	plastid	56.51	54.68
HORVU5Hr1G022750.1	Barley	plastid	56.51	52.6
TraesCS5D01G099000.1	Wheat	plastid	56.88	51.0
Zm00001d030638_P001	Maize	plastid	58.36	44.1

Protein Annotations

MapMan:1.1.4.3.2	Gene3D:3.40.1000.10	GO:A0A078GC34	UniProt:A0A078GC34	EnsemblPlants:CDY22909	ProteinID:CDY22909
ProteinID:CDY22909.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009523	GO:GO:0009579	GO:GO:0009654
GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0019898	EnsemblPlantsGene:GSBRNA2T00021279001	InterPro:IPR016123
InterPro:Mog1/PsbP_a/b/a-sand	PFAM:PF01789	PANTHER:PTHR31407	PANTHER:PTHR31407:SF15	InterPro:PsbP	SUPFAM:SSF55724
UniParc:UPI0004EDC9D1	SEG:seg	:	:	:	:

Description

BnaA01g18470DBnaA01g18470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GC34]

Coordinates

chrLK032137:-:319468..320991

Molecular Weight (calculated)

30554.6 Da

IEP (calculated)

9.399

GRAVY (calculated)

-0.406

Length

269 amino acids

Sequence
(BLAST)

001: METLISPRSL FPLLKKPTSK SSSSFSRPVS SQSPKLTKPE SPAPINLLTD AKQACAVGRR RSMMMGGFLM SGLMLSEANL PTSAFALTPV FREYIDTFDG
101: YSFKYPQNWI QVRGAGADIF FRDPIVLDEN LSVEFSSPSS SKYKSLEDLG SPEEAGKRVL RQYLTEFMST RLGVKRESNI LTTSSRVADD GNLYYQVEVN
201: IKSYANNNEL AVMPQDRVAR LEWDRRYLAV LGVENNRLYS LRLQTPEKVF LEEEKDLRRV MDSFRVEKI

Best Arabidopsis Sequence Match ( AT4G15510.1 )
(BLAST)

001: MASSAFAFPS YIITKGASTD SFKSTSLSSS RSLVTDFHLL FSRPISSGPK YQSAKSAKPE SPVAINCLTD AKQVCAVGRR KSMMMGLLMS GLIVSQANLP
101: TAFASTPVFR EYIDTFDGYS FKYPQNWIQV RGAGADIFFR DPVVLDENLS VEFSSPSSSN YTSLEDLGSP EEVGKRVLRQ YLTEFMSTRL GVKRQANILS
201: TSSRVADDGK LYYQVEVNIK SYANNNELAV MPQDRVARLE WNRRYLAVLG VENDRLYSIR LQTPEKVFLE EEKDLRRVMD SFRVEKI

Arabidopsis Description

PPD1PPD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UV94]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.