Factsheet for HORVU5Hr1G022750.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G093100.1	Wheat	plastid	92.73	96.4
TraesCS5A01G087200.1	Wheat	plastid	92.73	96.4
TraesCS5D01G099000.1	Wheat	plastid	95.5	92.0
Os07t0275901-00	Rice	cytosol	20.07	76.32
Os12t0564400-01	Rice	plasma membrane	63.32	73.49
Os07t0275100-00	Rice	endoplasmic reticulum, golgi, vacuole	60.55	68.63
OQU79328	Sorghum	endoplasmic reticulum, plastid	62.28	67.92
GSMUA_Achr3P12740_001	Banana	plastid	55.02	61.87
KRH68425	Soybean	nucleus, plastid	53.63	60.08
Os07t0275801-00	Rice	cytosol, mitochondrion, plastid	16.61	60.0
VIT_14s0060g00850.t01	Wine grape	plastid	49.48	57.66
CDY54970	Canola	plastid	52.94	57.52
Bra038081.1-P	Field mustard	plastid	52.25	56.55
CDY22740	Canola	plastid	52.25	56.55
CDY22909	Canola	plastid	52.6	56.51
Bra039542.1-P	Field mustard	plastid	52.6	56.51
KRG96702	Soybean	cytosol	36.68	54.92
Solyc01g106090.2.1	Tomato	plastid	53.98	54.36
PGSC0003DMT400027723	Potato	cytosol	53.63	54.01
AT4G15510.1	Thale cress	plastid	52.25	52.61
Zm00001d030638_P001	Maize	plastid	62.98	51.12

Protein Annotations

MapMan:1.1.4.3.2	Gene3D:3.40.1000.10	UniProt:A0A287QMH3	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009523	GO:GO:0009535	GO:GO:0009536	GO:GO:0009543
GO:GO:0009570	GO:GO:0009579	GO:GO:0009654	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020
GO:GO:0016043	GO:GO:0019898	GO:GO:0031977	GO:GO:0048564	EnsemblPlantsGene:HORVU5Hr1G022750	EnsemblPlants:HORVU5Hr1G022750.1
InterPro:IPR016123	InterPro:Mog1/PsbP_a/b/a-sand	PFAM:PF01789	PANTHER:PTHR31407	PANTHER:PTHR31407:SF15	InterPro:PsbP
SUPFAM:SSF55724	UniParc:UPI000B46FB43	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:117318333..117323192

Molecular Weight (calculated)

31882.1 Da

IEP (calculated)

8.963

GRAVY (calculated)

-0.299

Length

289 amino acids

Sequence
(BLAST)

001: PEPANASIPM SSRTCCSGLP ATPRRQAGHH TLPLPAACGL AFAPEFVSSS RRGRPPPLCC TSTARNRVVA SCSGKVPRRN VVSTLLSAST VLLLRPRQIT
101: LAETTGGAFR EYIDTFDGYS FIYPKGWIQV KGAGADIFFR DPVLLDVNMS VDISSPSSSN YKTVEDLGPP EKAAEGVLKQ YLTEFMSTRL GVRRESNVLS
201: ASSKVADDGK LYYEVEVNIK SYASNNELAV MPKDRVQSLE WNRRYLTVLG VENNQLYALR LQTPERLLSE EEGDLRRVMD SFRVNKIQA

Best Arabidopsis Sequence Match ( AT4G15510.1 )
(BLAST)

001: MASSAFAFPS YIITKGASTD SFKSTSLSSS RSLVTDFHLL FSRPISSGPK YQSAKSAKPE SPVAINCLTD AKQVCAVGRR KSMMMGLLMS GLIVSQANLP
101: TAFASTPVFR EYIDTFDGYS FKYPQNWIQV RGAGADIFFR DPVVLDENLS VEFSSPSSSN YTSLEDLGSP EEVGKRVLRQ YLTEFMSTRL GVKRQANILS
201: TSSRVADDGK LYYQVEVNIK SYANNNELAV MPQDRVARLE WNRRYLAVLG VENDRLYSIR LQTPEKVFLE EEKDLRRVMD SFRVEKI

Arabidopsis Description

PPD1PPD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UV94]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.