Factsheet for VIT_14s0060g00850.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0275901-00	Rice	cytosol	21.77	71.05
GSMUA_Achr3P12740_001	Banana	plastid	72.18	69.65
KRH68425	Soybean	nucleus, plastid	70.16	67.44
KRG96702	Soybean	cytosol	51.61	66.32
CDY54970	Canola	plastid	70.16	65.41
Bra038081.1-P	Field mustard	plastid	68.95	64.04
CDY22740	Canola	plastid	68.95	64.04
Os12t0564400-01	Rice	plasma membrane	62.5	62.25
Bra039542.1-P	Field mustard	plastid	66.94	61.71
CDY22909	Canola	plastid	66.53	61.34
Os07t0275100-00	Rice	endoplasmic reticulum, golgi, vacuole	61.69	60.0
AT4G15510.1	Thale cress	plastid	66.94	57.84
Solyc01g106090.2.1	Tomato	plastid	66.53	57.49
PGSC0003DMT400027723	Potato	cytosol	66.53	57.49
OQU79328	Sorghum	endoplasmic reticulum, plastid	61.29	57.36
Os07t0275801-00	Rice	cytosol, mitochondrion, plastid	18.15	56.25
TraesCS5B01G093100.1	Wheat	plastid	58.47	52.16
TraesCS5A01G087200.1	Wheat	plastid	58.06	51.8
HORVU5Hr1G022750.1	Barley	plastid	57.66	49.48
TraesCS5D01G099000.1	Wheat	plastid	58.47	48.33
Zm00001d030638_P001	Maize	plastid	62.9	43.82

Protein Annotations

MapMan:1.1.4.3.2	EntrezGene:100259632	wikigene:100259632	Gene3D:3.40.1000.10	ProteinID:CBI39622	ProteinID:CBI39622.3
UniProt:D7UA58	EMBL:FN596746	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009523	GO:GO:0009579
GO:GO:0009654	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0019898	InterPro:IPR016123
EntrezGene:LOC100259632	wikigene:LOC100259632	InterPro:Mog1/PsbP_a/b/a-sand	PFAM:PF01789	PANTHER:PTHR31407	PANTHER:PTHR31407:SF15
InterPro:PsbP	SUPFAM:SSF55724	TIGR:TC67557	UniParc:UPI0001BE4CFA	ArrayExpress:VIT_14s0060g00850	EnsemblPlantsGene:VIT_14s0060g00850
EnsemblPlants:VIT_14s0060g00850.t01	RefSeq:XP_002281448	RefSeq:XP_002281448.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr14:-:676731..679515

Molecular Weight (calculated)

28381.3 Da

IEP (calculated)

5.436

GRAVY (calculated)

-0.427

Length

248 amino acids

Sequence
(BLAST)

001: MSFHYPDFPA PFATTNYSAS SRAISCQLQT TKGFAVLRRD AMALIFSSYI FSRVGLHDVA LAQPSVGFRE YIDTFDGYSF KYPQNWIQVR GSGADIFFRD
101: PFVLDENLSV ELSSPSSSRY KSVEDLGQPQ EAGKKVLQQY LTEFMSTRLG VRRESNIVST SSRVADDGRT YYQVEVNIKS YANNNELAVM PTDRVTRLEW
201: DRRYLSVLGV ENNRLYELRL QTPESVFLEE ENELRQVMDS FRVNKASG

Best Arabidopsis Sequence Match ( AT4G15510.1 )
(BLAST)

001: MASSAFAFPS YIITKGASTD SFKSTSLSSS RSLVTDFHLL FSRPISSGPK YQSAKSAKPE SPVAINCLTD AKQVCAVGRR KSMMMGLLMS GLIVSQANLP
101: TAFASTPVFR EYIDTFDGYS FKYPQNWIQV RGAGADIFFR DPVVLDENLS VEFSSPSSSN YTSLEDLGSP EEVGKRVLRQ YLTEFMSTRL GVKRQANILS
201: TSSRVADDGK LYYQVEVNIK SYANNNELAV MPQDRVARLE WNRRYLAVLG VENDRLYSIR LQTPEKVFLE EEKDLRRVMD SFRVEKI

Arabidopsis Description

PPD1PPD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UV94]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.