Factsheet for Zm00001d052184_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
plastid: 22065420

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018130_P001	Maize	plastid	82.83	83.25
Os02t0759900-01	Rice	plastid	63.64	61.46
TraesCS6A01G314600.1	Wheat	plastid	52.02	55.68
TraesCS6D01G293900.1	Wheat	plastid	53.03	54.97
TraesCS6B01G344600.1	Wheat	plastid	52.02	53.93
KXG31149	Sorghum	nucleus	87.88	50.14
Os02t0548900-01	Rice	cytosol, vacuole	24.24	47.06
HORVU6Hr1G077440.3	Barley	mitochondrion	51.01	35.69
Zm00001d037323_P001	Maize	plastid	24.75	33.11
Zm00001d032232_P007	Maize	mitochondrion	25.25	31.65
Zm00001d027456_P001	Maize	plastid	23.23	30.67
Zm00001d051785_P001	Maize	plastid	23.23	29.3
Zm00001d005926_P001	Maize	plastid	24.75	27.07
Zm00001d021370_P001	Maize	plastid	17.68	22.73
Zm00001d012689_P001	Maize	plastid	18.18	21.69
Zm00001d029745_P004	Maize	plastid	20.2	21.05

Protein Annotations

EnsemblPlants:Zm00001d052184_P001	EnsemblPlants:Zm00001d052184_T001	EnsemblPlantsGene:Zm00001d052184	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222
PANTHER:PTHR33222:SF5	PFAM:PF14159	ProteinID:AQK56401.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00022129D2
UniProt:K7V109	MapMan:35.1	:	:	:	:

Description

Protein CURVATURE THYLAKOID 1D chloroplastic

Coordinates

chr4:-:182563207..182565812

Molecular Weight (calculated)

20689.6 Da

IEP (calculated)

4.594

GRAVY (calculated)

0.171

Length

198 amino acids

Sequence
(BLAST)

001: MELCVSTTAS VRATAAPISF APPRRGASAS TALPLHRRIP TRGWCCASAA VPDPAPSEEL ASASYTVVVA DKPDSPADDK VDEVSAAPSG SAEAPVAEPV
101: SSEASPSPST DDGGLDEILS KLNIEVTPIL ILTGSGAFVA LWILSSVVSA VDSVPLLPKL LELVGTGYSI WFTARHLLFK ESRDGMFAKF KDIKERII

Best Arabidopsis Sequence Match ( AT4G38100.1 )
(BLAST)

001: MELCTRSTTI ITHLPASFNG HGYLAGKSVD RISLPLQRNV ASLVLQSRTL RCSRKFPGET VTEETSTGVN EFGVEDRDGV VVAAEEKNSN SEAPQAEDEE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE

Arabidopsis Description

CURT1DProtein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.