Factsheet for Zm00001d018130_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
plastid: 22065420

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052184_P001	Maize	plastid	83.25	82.83
Os02t0759900-01	Rice	plastid	62.94	60.49
TraesCS6A01G314600.1	Wheat	plastid	53.81	57.3
TraesCS6B01G344600.1	Wheat	plastid	55.33	57.07
TraesCS6D01G293900.1	Wheat	plastid	54.82	56.54
Os02t0548900-01	Rice	cytosol, vacuole	22.84	44.12
HORVU6Hr1G077440.3	Barley	mitochondrion	53.3	37.1
Zm00001d037323_P001	Maize	plastid	26.9	35.81
Zm00001d027456_P001	Maize	plastid	25.38	33.33
Zm00001d051785_P001	Maize	plastid	25.89	32.48
Zm00001d032232_P007	Maize	mitochondrion	25.89	32.28
Zm00001d005926_P001	Maize	plastid	23.86	25.97
Zm00001d012689_P001	Maize	plastid	19.8	23.49
Zm00001d021370_P001	Maize	plastid	15.74	20.13
Zm00001d029745_P004	Maize	plastid	18.78	19.47

Protein Annotations

EnsemblPlants:Zm00001d018130_P001	EnsemblPlants:Zm00001d018130_T001	EnsemblPlantsGene:Zm00001d018130	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	InterPro:CAAD_dom	InterPro:CURT1	PANTHER:PTHR33222
PANTHER:PTHR33222:SF5	PFAM:PF14159	ProteinID:AQK75090.1	TMHMM:TMhelix	UniParc:UPI000220EC2A	UniProt:A0A1D6HKY5
MapMan:35.1	:	:	:	:	:

Description

Protein CURVATURE THYLAKOID 1D chloroplastic

Coordinates

chr5:+:214939176..214944676

Molecular Weight (calculated)

20857.9 Da

IEP (calculated)

4.509

GRAVY (calculated)

0.169

Length

197 amino acids

Sequence
(BLAST)

001: MELCVSTPPS SVRATAAPIS FAPPRRGASA STAVPPHRRI PTRVWRCASA AVPGPVPSEE PASASYAVVV TDKPDTPADD KAEEVSAAPS GSAEAPMAEL
101: VPSEASSSPD DGGLDEILSK LNIEVTPTLI LTGFGAFIAL WILSSVVAAV DSVPLLPKLL ELIGTAYTIW FIARYLLFKE SRDELFAKFE DLKQRII

Best Arabidopsis Sequence Match ( AT4G38100.1 )
(BLAST)

001: MELCTRSTTI ITHLPASFNG HGYLAGKSVD RISLPLQRNV ASLVLQSRTL RCSRKFPGET VTEETSTGVN EFGVEDRDGV VVAAEEKNSN SEAPQAEDEE
101: TQALEFLNDI KLDSDKTYSI LLYGSGAIVA LYLTSAIVSS LEAIPLFPKL MEVVGLGYTL WFTTRYLLFK RNREELKTKV SEIKKQVLGS DSE

Arabidopsis Description

CURT1DProtein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.