Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58300 | Canola | plastid | 90.29 | 90.29 |
| CDY38074 | Canola | cytosol, mitochondrion, plastid | 87.38 | 87.38 |
| Bra018169.1-P | Field mustard | cytosol, extracellular | 81.55 | 80.77 |
| AT3G47070.1 | Thale cress | cytosol | 65.05 | 67.0 |
| Bra002617.1-P | Field mustard | plastid | 62.14 | 63.37 |
| KRH30324 | Soybean | cytosol, extracellular, mitochondrion | 49.51 | 55.43 |
| VIT_06s0004g06170.t01 | Wine grape | extracellular | 44.66 | 52.27 |
| KRG98326 | Soybean | cytosol, plastid | 51.46 | 47.32 |
| PGSC0003DMT400078225 | Potato | plastid | 47.57 | 47.12 |
| GSMUA_AchrUn_... | Banana | extracellular | 46.6 | 46.6 |
| Solyc06g076790.1.1 | Tomato | nucleus, plastid | 45.63 | 44.34 |
| PGSC0003DMT400010663 | Potato | plastid | 42.72 | 44.0 |
Protein Annotations
Description
AT3G47070 (E=4e-019) | unknown protein
Coordinates
chrA06:+:12900718..12901029
Molecular Weight (calculated)
10651.8 Da
IEP (calculated)
10.341
GRAVY (calculated)
-0.350
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSLLMSFA PATVRVYATT AKGASGGAKE EKSPLDFVLG YLTKQDQFYE TDPILKKVEK EQGTTGGRGT FRGGGKSAAP VPVAPKKNDG GGLGGLAGLF
101: NKK
101: NKK
1: MVSSLLMSFA PATVRVYATS TKGGSGGPKE EKNPIDFVLG FMTKQDQFYE TNPLLKKVDE KEGTTTGGRG TVRGGKNSAP TPVPKKSEGG FGGLGSLFKK
Arabidopsis Description
Thylakoid soluble phosphoprotein [Source:UniProtKB/TrEMBL;Acc:Q9SD66]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.