Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 2
- cytosol 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30324 | Soybean | cytosol, extracellular, mitochondrion | 72.32 | 88.04 |
| VIT_06s0004g06170.t01 | Wine grape | extracellular | 58.04 | 73.86 |
| GSMUA_AchrUn_... | Banana | extracellular | 60.71 | 66.02 |
| Bra002617.1-P | Field mustard | plastid | 50.89 | 56.44 |
| CDX80332 | Canola | plastid | 50.89 | 56.44 |
| CDY54176 | Canola | plastid | 50.89 | 56.44 |
| Solyc06g076790.1.1 | Tomato | nucleus, plastid | 50.89 | 53.77 |
| PGSC0003DMT400078225 | Potato | plastid | 49.11 | 52.88 |
| CDY58300 | Canola | plastid | 48.21 | 52.43 |
| Bra019494.1-P | Field mustard | plastid | 47.32 | 51.46 |
| Bra018169.1-P | Field mustard | cytosol, extracellular | 47.32 | 50.96 |
| CDX99069 | Canola | cytosol, extracellular | 47.32 | 50.96 |
| CDY38074 | Canola | cytosol, mitochondrion, plastid | 46.43 | 50.49 |
| AT3G47070.1 | Thale cress | cytosol | 43.75 | 49.0 |
| PGSC0003DMT400010663 | Potato | plastid | 41.96 | 47.0 |
| CDX86122 | Canola | cytosol | 49.11 | 44.0 |
Protein Annotations
| EMBL:ACUP02010875 | EnsemblPlants:KRG98326 | EnsemblPlantsGene:GLYMA_18G065900 | EntrezGene:100788940 | InterPro:TSP9 | InterPro:TSP9_sf |
| PANTHER:PTHR36370 | PANTHER:PTHR36370:SF5 | PFAM:PF11493 | ProteinID:KRG98326 | ProteinID:KRG98326.1 | SEG:seg |
| SUPFAM:SSF144256 | UniParc:UPI0006EDBC35 | UniProt:A0A0R0EX21 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr18:-:6028682..6029503
Molecular Weight (calculated)
11767.1 Da
IEP (calculated)
10.073
GRAVY (calculated)
-0.320
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVVHPHVKF TTSADFSACN MASIIMSFAP ATGRVFAATA AKGAGGSKEE KGLLDWILGG LQKEDQLLET DPILKKVEEK NGGTTSNTGR NKNSVAVPQK
101: KKGGFGGLFA KN
101: KKGGFGGLFA KN
1: MVSSLLMSFA PATVRVYATS TKGGSGGPKE EKNPIDFVLG FMTKQDQFYE TNPLLKKVDE KEGTTTGGRG TVRGGKNSAP TPVPKKSEGG FGGLGSLFKK
Arabidopsis Description
Thylakoid soluble phosphoprotein [Source:UniProtKB/TrEMBL;Acc:Q9SD66]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.