Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
- plasma membrane 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078225 | Potato | plastid | 68.0 | 65.38 |
| VIT_06s0004g06170.t01 | Wine grape | extracellular | 49.0 | 55.68 |
| KRH30324 | Soybean | cytosol, extracellular, mitochondrion | 46.0 | 50.0 |
| GSMUA_AchrUn_... | Banana | extracellular | 50.0 | 48.54 |
| CDY58300 | Canola | plastid | 45.0 | 43.69 |
| Bra018169.1-P | Field mustard | cytosol, extracellular | 45.0 | 43.27 |
| CDX99069 | Canola | cytosol, extracellular | 45.0 | 43.27 |
| Bra019494.1-P | Field mustard | plastid | 44.0 | 42.72 |
| Bra002617.1-P | Field mustard | plastid | 43.0 | 42.57 |
| CDX80332 | Canola | plastid | 43.0 | 42.57 |
| CDY54176 | Canola | plastid | 43.0 | 42.57 |
| KRG98326 | Soybean | cytosol, plastid | 47.0 | 41.96 |
| AT3G47070.1 | Thale cress | cytosol | 41.0 | 41.0 |
| CDY38074 | Canola | cytosol, mitochondrion, plastid | 41.0 | 39.81 |
| CDX86122 | Canola | cytosol | 45.0 | 36.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400010663 | EnsemblPlantsGene:PGSC0003DMG400004165 | InterPro:TSP9 | InterPro:TSP9_sf | PANTHER:PTHR36370 | PANTHER:PTHR36370:SF1 |
| PFAM:PF11493 | PGSC:PGSC0003DMG400004165 | SUPFAM:SSF144256 | UniParc:UPI000296E3C1 | UniProt:M0ZYE5 | MapMan:35.2 |
Description
Thylakoid soluble phosphoprotein [Source:PGSC_GENE;Acc:PGSC0003DMG400004165]
Coordinates
chr6:+:3451772..3452389
Molecular Weight (calculated)
10882.0 Da
IEP (calculated)
10.322
GRAVY (calculated)
-0.326
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MASLNLFVPP IATTTQRRVV YTRATSTKSF GVSSEEKSIL DFVLGALQKE DQLLETDPIM KKVEGKSGTT TSFNKKSVSI SPPQKDYNGF GGFGSLFAKK
1: MVSSLLMSFA PATVRVYATS TKGGSGGPKE EKNPIDFVLG FMTKQDQFYE TNPLLKKVDE KEGTTTGGRG TVRGGKNSAP TPVPKKSEGG FGGLGSLFKK
Arabidopsis Description
Thylakoid soluble phosphoprotein [Source:UniProtKB/TrEMBL;Acc:Q9SD66]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.