Factsheet for TraesCS7D01G271300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G037910.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G036960.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G035170.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G034460.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G033730.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G033460.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G032950.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G037400.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G029930.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G028390.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G026830.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G026170.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU0Hr1G024680.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU2Hr1G048390.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU6Hr1G037230.1	Barley	cytosol, nucleus, plastid	94.52	94.52
HORVU6Hr1G049410.1	Barley	cytosol, nucleus, plastid	94.52	94.52
AGP50783	Barley	plastid	94.52	94.52
TraesCSU01G269100.1	Wheat	plastid	93.15	93.15
TraesCS1D01G182900.1	Wheat	cytosol	93.15	93.15
TraesCS3B01G187500.1	Wheat	cytosol	93.15	93.15
HORVU0Hr1G027540.1	Barley	cytosol, plastid	94.52	90.79
HORVU5Hr1G065030.1	Barley	cytosol, plastid	94.52	90.79
HORVU0Hr1G030700.1	Barley	cytosol, plastid	94.52	90.79
GRMZM5G831399_P01	Maize	plastid	90.41	90.41
EES02991	Sorghum	cytosol, nucleus, plastid	90.41	90.41
TraesCS5D01G559700.1	Wheat	cytosol	90.41	90.41
TraesCS3D01G029800.1	Wheat	cytosol	90.41	90.41
OQU86906	Sorghum	golgi, plastid	79.45	89.23
TraesCS3D01G447200.1	Wheat	cytosol, golgi, plastid	86.3	87.5
TraesCS4D01G043300.1	Wheat	cytosol, golgi, plastid	86.3	86.3
TraesCS5D01G009200.1	Wheat	cytosol	91.78	85.9
KXG23489	Sorghum	cytosol, plastid	86.3	85.14
KXG23491	Sorghum	cytosol, plastid	84.93	83.78
HORVU7Hr1G065800.1	Barley	cytosol	86.3	82.89
CAA33976	Rice	cytosol	80.82	80.82
CDY28597	Canola	plastid	76.71	76.71
CDY47372	Canola	plastid	76.71	76.71
ATCG00710.1	Thale cress	plastid	76.71	76.71
Solyc01g007520.2.1	Tomato	plastid	75.34	75.34
KRH65831	Soybean	plastid	73.97	73.97
KRH04778	Soybean	plastid	57.53	61.76
KRH57910	Soybean	cytosol, extracellular, plastid	43.84	44.44

Protein Annotations

MapMan:1.1.1.2.3	Gene3D:1.20.5.880	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009523	GO:GO:0009579	GO:GO:0009987
GO:GO:0015979	GO:GO:0016020	GO:GO:0042301	GO:GO:0050821	InterPro:IPR036863	HAMAP:MF_00752
PFAM:PD003584	PFAM:PF00737	InterPro:PSII_PsbH	InterPro:PSII_PsbH_sf	PANTHER:PTHR34469	PANTHER:PTHR34469:SF4
SUPFAM:SSF161025	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G271300	EnsemblPlants:TraesCS7D01G271300.1	SEG:seg	:

Description

No Description!

Coordinates

chr7D:+:259803950..259804171

Molecular Weight (calculated)

7944.7 Da

IEP (calculated)

9.078

GRAVY (calculated)

0.099

Length

73 amino acids

Sequence
(BLAST)

1: MATQTIEDRS KPRPKRTGAG SLLKPLNSEY GKVAPGWGTT PFMGVAMDLF SIFLSIILEI YNSSILLDGI LTN

Best Arabidopsis Sequence Match ( ATCG00710.1 )
(BLAST)

1: MATQTVEDSS RSGPRSTTVG KLLKPLNSEY GKVAPGWGTT PLMGVAMALF AVFLSIILEI YNSSVLLDGI SVN

Arabidopsis Description

PSBHPhotosystem II reaction center protein H [Source:UniProtKB/Swiss-Prot;Acc:P56780]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.