Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28597 | Canola | plastid | 98.63 | 98.63 |
| CDY47372 | Canola | plastid | 98.63 | 98.63 |
| Solyc01g007520.2.1 | Tomato | plastid | 91.78 | 91.78 |
| CAA33976 | Rice | cytosol | 90.41 | 90.41 |
| EES02991 | Sorghum | cytosol, nucleus, plastid | 84.93 | 84.93 |
| GRMZM5G831399_P01 | Maize | plastid | 84.93 | 84.93 |
| TraesCSU01G269100.1 | Wheat | plastid | 83.56 | 83.56 |
| HORVU0Hr1G026830.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| AGP50783 | Barley | plastid | 82.19 | 82.19 |
| TraesCS3B01G187500.1 | Wheat | cytosol | 82.19 | 82.19 |
| HORVU0Hr1G024680.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU6Hr1G049410.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU6Hr1G037230.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU2Hr1G048390.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU0Hr1G037910.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU0Hr1G037400.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU0Hr1G036960.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU0Hr1G034460.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU0Hr1G026170.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU0Hr1G028390.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU0Hr1G029930.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU0Hr1G032950.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU0Hr1G035170.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU0Hr1G033460.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| HORVU0Hr1G033730.1 | Barley | cytosol, nucleus, plastid | 82.19 | 82.19 |
| OQU86906 | Sorghum | golgi, plastid | 72.6 | 81.54 |
| TraesCSU01G035300.1 | Wheat | cytosol | 80.82 | 80.82 |
| TraesCS5D01G559700.1 | Wheat | cytosol | 80.82 | 80.82 |
| TraesCS3D01G029800.1 | Wheat | cytosol | 80.82 | 80.82 |
| TraesCS1D01G182900.1 | Wheat | cytosol | 80.82 | 80.82 |
| TraesCS1B01G082000.1 | Wheat | cytosol | 79.45 | 80.56 |
| KXG23489 | Sorghum | cytosol, plastid | 80.82 | 79.73 |
| KRH65831 | Soybean | plastid | 79.45 | 79.45 |
| HORVU5Hr1G065030.1 | Barley | cytosol, plastid | 82.19 | 78.95 |
| HORVU0Hr1G030700.1 | Barley | cytosol, plastid | 82.19 | 78.95 |
| HORVU0Hr1G027540.1 | Barley | cytosol, plastid | 82.19 | 78.95 |
| TraesCS3D01G447200.1 | Wheat | cytosol, golgi, plastid | 76.71 | 77.78 |
| TraesCS5D01G009200.1 | Wheat | cytosol | 82.19 | 76.92 |
| TraesCS1A01G130300.1 | Wheat | cytosol | 76.71 | 76.71 |
| TraesCS7D01G271300.1 | Wheat | cytosol | 76.71 | 76.71 |
| TraesCS4D01G043300.1 | Wheat | cytosol, golgi, plastid | 76.71 | 76.71 |
| KXG23491 | Sorghum | cytosol, plastid | 76.71 | 75.68 |
| KRH04778 | Soybean | plastid | 68.49 | 73.53 |
| HORVU7Hr1G065800.1 | Barley | cytosol | 72.6 | 69.74 |
| TraesCS6B01G126500.1 | Wheat | extracellular | 72.6 | 68.83 |
| TraesCS7A01G289800.1 | Wheat | plasma membrane | 67.12 | 64.47 |
| TraesCS7A01G095600.1 | Wheat | extracellular | 63.01 | 62.16 |
| HORVU1Hr1G044400.1 | Barley | cytosol | 43.84 | 54.24 |
| KRH57910 | Soybean | cytosol, extracellular, plastid | 52.05 | 52.78 |
| HORVU4Hr1G021930.1 | Barley | plastid | 41.1 | 50.85 |
Protein Annotations
| MapMan:1.1.1.2.3 | Gene3D:1.20.5.880 | PDB:5MDX | EntrezGene:844730 | UniProt:A0A1B1W4X2 | ProteinID:ANW47819.1 |
| ArrayExpress:ATCG00710 | EnsemblPlantsGene:ATCG00710 | RefSeq:ATCG00710 | TAIR:ATCG00710 | RefSeq:ATCG00710-TAIR-G | EnsemblPlants:ATCG00710.1 |
| TAIR:ATCG00710.1 | ProteinID:BAA84414.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009523 |
| GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009654 | GO:GO:0009987 |
| GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0042301 | GO:GO:0050821 | InterPro:IPR036863 |
| HAMAP:MF_00752 | RefSeq:NP_051087.1 | UniProt:P56780 | PFAM:PD003584 | PFAM:PF00737 | Symbol:PSBH |
| InterPro:PSII_PsbH | InterPro:PSII_PsbH_sf | PANTHER:PTHR34469 | PANTHER:PTHR34469:SF4 | SUPFAM:SSF161025 | TMHMM:TMhelix |
| UniParc:UPI00001638AA | : | : | : | : | : |
Description
PSBHPhotosystem II reaction center protein H [Source:UniProtKB/Swiss-Prot;Acc:P56780]
Coordinates
chrPt:+:74485..74706
Molecular Weight (calculated)
7702.4 Da
IEP (calculated)
6.665
GRAVY (calculated)
0.351
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MATQTVEDSS RSGPRSTTVG KLLKPLNSEY GKVAPGWGTT PLMGVAMALF AVFLSIILEI YNSSVLLDGI SVN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.