Factsheet for HORVU0Hr1G027540.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
PProwler:	secretory
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AGP50783	Barley	plastid	96.05	100.0
HORVU6Hr1G049410.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU6Hr1G037230.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU5Hr1G065030.1	Barley	cytosol, plastid	100.0	100.0
HORVU2Hr1G048390.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G037910.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G037400.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G036960.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G035170.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G034460.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G033730.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G033460.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G032950.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G029930.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G028390.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G026830.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G026170.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G024680.1	Barley	cytosol, nucleus, plastid	96.05	100.0
HORVU0Hr1G030700.1	Barley	cytosol, plastid	100.0	100.0
TraesCSU01G269100.1	Wheat	plastid	94.74	98.63
TraesCS3B01G187500.1	Wheat	cytosol	93.42	97.26
TraesCSU01G035300.1	Wheat	cytosol	92.11	95.89
GRMZM5G831399_P01	Maize	plastid	92.11	95.89
TraesCS1D01G182900.1	Wheat	cytosol	92.11	95.89
TraesCS3D01G029800.1	Wheat	cytosol	92.11	95.89
EES02991	Sorghum	cytosol, nucleus, plastid	92.11	95.89
TraesCS5D01G559700.1	Wheat	cytosol	92.11	95.89
TraesCS7D01G271300.1	Wheat	cytosol	90.79	94.52
OQU86906	Sorghum	golgi, plastid	80.26	93.85
TraesCS1A01G130300.1	Wheat	cytosol	89.47	93.15
TraesCS3D01G447200.1	Wheat	cytosol, golgi, plastid	88.16	93.06
TraesCS1B01G082000.1	Wheat	cytosol	86.84	91.67
TraesCS5D01G009200.1	Wheat	cytosol	93.42	91.03
TraesCS4D01G043300.1	Wheat	cytosol, golgi, plastid	86.84	90.41
KXG23489	Sorghum	cytosol, plastid	86.84	89.19
HORVU7Hr1G065800.1	Barley	cytosol	86.84	86.84
CAA33976	Rice	cytosol	82.89	86.3
KXG23491	Sorghum	cytosol, plastid	82.89	85.14
ATCG00710.1	Thale cress	plastid	78.95	82.19
CDY47372	Canola	plastid	78.95	82.19
CDY28597	Canola	plastid	78.95	82.19
Solyc01g007520.2.1	Tomato	plastid	77.63	80.82
KRH65831	Soybean	plastid	72.37	75.34
KRH04778	Soybean	plastid	59.21	66.18
HORVU4Hr1G021930.1	Barley	plastid	51.32	66.1
HORVU1Hr1G044400.1	Barley	cytosol	43.42	55.93
KRH57910	Soybean	cytosol, extracellular, plastid	43.42	45.83

Protein Annotations

MapMan:1.1.1.2.3	Gene3D:1.20.5.880	UniProt:A0A287EA90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009523	GO:GO:0009579
GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0042301	GO:GO:0050821
EnsemblPlantsGene:HORVU0Hr1G027540	EnsemblPlants:HORVU0Hr1G027540.1	InterPro:IPR036863	HAMAP:MF_00752	PFAM:PD003584	PFAM:PF00737
InterPro:PSII_PsbH	InterPro:PSII_PsbH_sf	PANTHER:PTHR34469	PANTHER:PTHR34469:SF4	SUPFAM:SSF161025	TMHMM:TMhelix
UniParc:UPI000B467CFD	:	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:-:147378310..147378540

Molecular Weight (calculated)

8191.0 Da

IEP (calculated)

6.707

GRAVY (calculated)

0.293

Length

76 amino acids

Sequence
(BLAST)

1: IEFMATQTVE DSSKPRPKRT GAGSLLKPLN SEYGKVAPGW GTTPFMGVAM ALFAIFLSII LEIYNSSILL DGILTN

Best Arabidopsis Sequence Match ( ATCG00710.1 )
(BLAST)

1: MATQTVEDSS RSGPRSTTVG KLLKPLNSEY GKVAPGWGTT PLMGVAMALF AVFLSIILEI YNSSVLLDGI SVN

Arabidopsis Description

PSBHPhotosystem II reaction center protein H [Source:UniProtKB/Swiss-Prot;Acc:P56780]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.