Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU86906 | Sorghum | golgi, plastid | 54.24 | 49.23 |
| HORVU0Hr1G028390.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G037910.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G037400.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G036960.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G035170.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G034460.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G033730.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G033460.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G032950.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU2Hr1G048390.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G029930.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU6Hr1G037230.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G026830.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G026170.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU0Hr1G024680.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| GRMZM5G831399_P01 | Maize | plastid | 55.93 | 45.21 |
| EES02991 | Sorghum | cytosol, nucleus, plastid | 55.93 | 45.21 |
| HORVU6Hr1G049410.1 | Barley | cytosol, nucleus, plastid | 55.93 | 45.21 |
| CAA33976 | Rice | cytosol | 55.93 | 45.21 |
| AGP50783 | Barley | plastid | 55.93 | 45.21 |
| ATCG00710.1 | Thale cress | plastid | 54.24 | 43.84 |
| CDY47372 | Canola | plastid | 54.24 | 43.84 |
| CDY28597 | Canola | plastid | 54.24 | 43.84 |
| HORVU0Hr1G030700.1 | Barley | cytosol, plastid | 55.93 | 43.42 |
| HORVU5Hr1G065030.1 | Barley | cytosol, plastid | 55.93 | 43.42 |
| HORVU0Hr1G027540.1 | Barley | cytosol, plastid | 55.93 | 43.42 |
| Solyc01g007520.2.1 | Tomato | plastid | 52.54 | 42.47 |
| HORVU7Hr1G065800.1 | Barley | cytosol | 54.24 | 42.11 |
| KXG23489 | Sorghum | cytosol, plastid | 52.54 | 41.89 |
| HORVU4Hr1G021930.1 | Barley | plastid | 40.68 | 40.68 |
| TraesCS6B01G126500.1 | Wheat | extracellular | 52.54 | 40.26 |
| TraesCS7A01G289800.1 | Wheat | plasma membrane | 50.85 | 39.47 |
| KXG23491 | Sorghum | cytosol, plastid | 49.15 | 39.19 |
| TraesCS7A01G095600.1 | Wheat | extracellular | 49.15 | 39.19 |
| KRH65831 | Soybean | plastid | 47.46 | 38.36 |
| KRH04778 | Soybean | plastid | 40.68 | 35.29 |
| KRH57910 | Soybean | cytosol, extracellular, plastid | 37.29 | 30.56 |
Protein Annotations
| MapMan:1.1.1.2.3 | Gene3D:1.20.5.880 | UniProt:A0A287FCM5 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009523 | GO:GO:0009579 |
| GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0042301 | GO:GO:0050821 | EnsemblPlantsGene:HORVU1Hr1G044400 |
| EnsemblPlants:HORVU1Hr1G044400.1 | InterPro:IPR036863 | PFAM:PD003584 | PFAM:PF00737 | InterPro:PSII_PsbH | InterPro:PSII_PsbH_sf |
| PANTHER:PTHR34469 | PANTHER:PTHR34469:SF4 | SUPFAM:SSF161025 | UniParc:UPI000B483AD2 | : | : |
Description
No Description!
Coordinates
chrchr1H:+:322796701..322797001
Molecular Weight (calculated)
6375.8 Da
IEP (calculated)
4.104
GRAVY (calculated)
0.420
Length
59 amino acids
Sequence
(BLAST)
(BLAST)
1: MVLNPGSFLK PLTSEYGKVA PGWGTTPFME VEVALTVCDA LDLIIYNTSF ILQARGLEG
1: MATQTVEDSS RSGPRSTTVG KLLKPLNSEY GKVAPGWGTT PLMGVAMALF AVFLSIILEI YNSSVLLDGI SVN
Arabidopsis Description
PSBHPhotosystem II reaction center protein H [Source:UniProtKB/Swiss-Prot;Acc:P56780]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.