Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G560400.1 | Wheat | plastid | 94.14 | 93.85 |
| HORVU5Hr1G124210.2 | Barley | plastid | 92.9 | 92.33 |
| TraesCS4A01G319000.1 | Wheat | plastid | 92.59 | 92.31 |
| Zm00001d034904_P001 | Maize | plastid | 54.94 | 77.73 |
| Zm00001d034900_P001 | Maize | plastid | 70.06 | 70.5 |
| Os03t0857400-01 | Rice | plasma membrane | 69.44 | 69.44 |
| GSMUA_Achr2P12240_001 | Banana | plastid | 65.43 | 67.09 |
| GSMUA_Achr4P28830_001 | Banana | cytosol, peroxisome, plasma membrane | 58.02 | 66.67 |
| KRH26378 | Soybean | plasma membrane | 29.32 | 64.19 |
| KRH77457 | Soybean | plastid | 62.04 | 63.61 |
| PGSC0003DMT400058521 | Potato | plastid | 62.65 | 63.44 |
| AT4G22890.1 | Thale cress | plastid | 62.35 | 62.35 |
| Bra000757.1-P | Field mustard | plastid | 61.42 | 62.19 |
| CDX90812 | Canola | plastid | 61.42 | 62.19 |
| CDY41285 | Canola | plastid | 61.11 | 62.07 |
| Bra013653.1-P | Field mustard | plastid | 61.11 | 62.07 |
| PGSC0003DMT400032525 | Potato | plastid | 61.11 | 62.07 |
| KRH04003 | Soybean | plastid | 63.58 | 62.05 |
| CDY10819 | Canola | plastid | 60.8 | 61.76 |
| KRH57278 | Soybean | plastid | 61.11 | 61.68 |
| CDY51552 | Canola | plastid | 60.8 | 61.56 |
| VIT_02s0025g04710.t01 | Wine grape | plastid | 61.42 | 61.04 |
| CDX94134 | Canola | plastid | 60.19 | 60.94 |
| Bra019349.1-P | Field mustard | plastid | 60.19 | 60.94 |
| CDY68977 | Canola | plastid | 60.19 | 60.94 |
| AT4G11960.1 | Thale cress | plastid | 58.64 | 60.7 |
| Solyc08g007770.2.1 | Tomato | plastid | 57.1 | 60.26 |
| Solyc08g080050.2.1 | Tomato | plastid | 57.1 | 60.06 |
| KXG37086 | Sorghum | plastid | 69.75 | 55.66 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G569800.1 | EnsemblPlantsGene:TraesCS5D01G569800 | PANTHER:PTHR31032 | PANTHER:PTHR31032:SF1 | SEG:seg | TMHMM:TMhelix |
| MapMan:1.1.6.1.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:565975092..565977278
Molecular Weight (calculated)
35797.2 Da
IEP (calculated)
4.960
GRAVY (calculated)
-0.010
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEVVALSP ASRLPSLSSR PAASSSSRAH RAARSARSPP ALAVTTFALG RRRQALLLLR PRATEQQGQV QQQEEEVVDG NVLPYCSIDG KKKKTIGEME
101: QEFLRALQSF YYDQKAIMSN EEFDNLKEEL MWEGSSVVML SADEQRLLEA SMAYIAGNPI MSDAEFDELK LRLKQDGSDI VTEGPRCSLR SRKVYSDLTV
201: DYLKMFLLNV PATIVALGLF FFIDELTGFE VNVFQFPEPF GFIFTYFAAL PLILVTAQVV TKAIINDVLI LKGPCPNCGT ENLSFYGTIL SIESGGATNN
301: VKCANCKTVM VYDSKTRLIT LPDS
101: QEFLRALQSF YYDQKAIMSN EEFDNLKEEL MWEGSSVVML SADEQRLLEA SMAYIAGNPI MSDAEFDELK LRLKQDGSDI VTEGPRCSLR SRKVYSDLTV
201: DYLKMFLLNV PATIVALGLF FFIDELTGFE VNVFQFPEPF GFIFTYFAAL PLILVTAQVV TKAIINDVLI LKGPCPNCGT ENLSFYGTIL SIESGGATNN
301: VKCANCKTVM VYDSKTRLIT LPDS
001: MGSKMLFSLT SPRLFSAVSR KPSSSFSPSP PSPSSRTQWT QLSPGKSISL RRRVFLLPAK ATTEQSGPVG GDNVDSNVLP YCSINKAEKK TIGEMEQEFL
101: QALQSFYYDG KAIMSNEEFD NLKEELMWEG SSVVMLSSDE QRFLEASMAY VSGNPILNDE EYDKLKLKLK IDGSDIVSEG PRCSLRSKKV YSDLAVDYFK
201: MLLLNVPATV VALGLFFFLD DITGFEITYI MELPEPYSFI FTWFAAVPVI VYLALSITKL IIKDFLILKG PCPNCGTENT SFFGTILSIS SGGKTNTVKC
301: TNCGTAMVYD SGSRLITLPE GSQA
101: QALQSFYYDG KAIMSNEEFD NLKEELMWEG SSVVMLSSDE QRFLEASMAY VSGNPILNDE EYDKLKLKLK IDGSDIVSEG PRCSLRSKKV YSDLAVDYFK
201: MLLLNVPATV VALGLFFFLD DITGFEITYI MELPEPYSFI FTWFAAVPVI VYLALSITKL IIKDFLILKG PCPNCGTENT SFFGTILSIS SGGKTNTVKC
301: TNCGTAMVYD SGSRLITLPE GSQA
Arabidopsis Description
PGRL1APGR5-LIKE A [Source:UniProtKB/TrEMBL;Acc:A0A178UU76]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.