Factsheet for HORVU5Hr1G124210.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
AGP50784
HORVU0Hr1G034350.1
HORVU0Hr1G037920.1
HORVU1Hr1G003510.1
HORVU1Hr1G063040.1
HORVU2Hr1G062090.1
HORVU5Hr1G065020.1
HORVU5Hr1G109710.2
HORVU6Hr1G000620.2
HORVU6Hr1G049420.1
HORVU6Hr1G049430.1
HORVU7Hr1G002210.8
HORVU7Hr1G052180.1
HORVU7Hr1G077740.1
HORVU7Hr1G077750.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22890.1	HORVU6Hr1G000620.2	AT1G20020.1	18243102
AT4G22890.1	HORVU7Hr1G002210.8	AT1G20020.1	18243102
AT4G22890.1	HORVU7Hr1G077740.1	AT1G60950.1	18243102
AT4G22890.1	HORVU7Hr1G077750.1	AT1G60950.1	18243102
AT4G22890.1	HORVU5Hr1G109710.2	AT4G02770.1	18243102
AT4G22890.1	HORVU6Hr1G000620.2	AT5G66190.1	18243102
AT4G22890.1	HORVU7Hr1G002210.8	AT5G66190.1	18243102
AT4G22890.1	AGP50784	ATCG00720.1	18243102
AT4G22890.1	HORVU0Hr1G034350.1	ATCG00720.1	18243102
AT4G22890.1	HORVU0Hr1G037920.1	ATCG00720.1	18243102
AT4G22890.1	HORVU1Hr1G003510.1	ATCG00720.1	18243102
AT4G22890.1	HORVU1Hr1G063040.1	ATCG00720.1	18243102
AT4G22890.1	HORVU2Hr1G062090.1	ATCG00720.1	18243102
AT4G22890.1	HORVU5Hr1G065020.1	ATCG00720.1	18243102
AT4G22890.1	HORVU6Hr1G049420.1	ATCG00720.1	18243102
AT4G22890.1	HORVU6Hr1G049430.1	ATCG00720.1	18243102
AT4G22890.1	HORVU7Hr1G052180.1	ATCG00720.1	18243102

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G560400.1	Wheat	plastid	96.32	96.62
TraesCS4A01G319000.1	Wheat	plastid	93.86	94.15
TraesCS5D01G569800.1	Wheat	plastid	92.33	92.9
Zm00001d034904_P001	Maize	plastid	54.6	77.73
Zm00001d034900_P001	Maize	plastid	69.63	70.5
Os03t0857400-01	Rice	plasma membrane	67.79	68.21
GSMUA_Achr2P12240_001	Banana	plastid	64.42	66.46
GSMUA_Achr4P28830_001	Banana	cytosol, peroxisome, plasma membrane	57.36	66.31
KRH26378	Soybean	plasma membrane	29.14	64.19
KRH77457	Soybean	plastid	60.74	62.66
CDY10819	Canola	plastid	61.04	62.38
AT4G22890.1	Thale cress	plastid	61.96	62.35
PGSC0003DMT400058521	Potato	plastid	61.04	62.19
CDY41285	Canola	plastid	60.74	62.07
Bra013653.1-P	Field mustard	plastid	60.74	62.07
Bra000757.1-P	Field mustard	plastid	60.43	61.56
CDX90812	Canola	plastid	60.43	61.56
PGSC0003DMT400032525	Potato	plastid	60.12	61.44
KRH57278	Soybean	plastid	60.43	61.37
Bra019349.1-P	Field mustard	plastid	60.12	61.25
CDY68977	Canola	plastid	60.12	61.25
CDX94134	Canola	plastid	59.82	60.94
CDY51552	Canola	plastid	59.82	60.94
KRH04003	Soybean	plastid	61.96	60.84
Solyc08g080050.2.1	Tomato	plastid	57.36	60.71
VIT_02s0025g04710.t01	Wine grape	plastid	60.43	60.43
AT4G11960.1	Thale cress	plastid	57.98	60.38
Solyc08g007770.2.1	Tomato	plastid	56.13	59.61
KXG37086	Sorghum	plastid	69.02	55.42

Protein Annotations

EnsemblPlants:HORVU5Hr1G124210.2	EnsemblPlantsGene:HORVU5Hr1G124210	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR31032
PANTHER:PTHR31032:SF1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B4737F3	UniProt:A0A287T1C5	MapMan:1.1.6.1.2

Description

No Description!

Coordinates

chrchr5H:-:665598712..665602034

Molecular Weight (calculated)

35860.2 Da

IEP (calculated)

4.950

GRAVY (calculated)

-0.049

Length

326 amino acids

Sequence
(BLAST)

001: MAAEVVALSP ASRLPSLSSR PNALSASSSR PRAPRGARAP RSPPALAFST SHRRQALLLL RPRATEQQGQ VQQQEDDVVD GNVLPYCSID GKKKKTIGEM
101: EQEFLRALQS FYYDQKAIMS NEEFDNLKEE LMWEGSSVVM LSADEQRLLE ASMAYIAGNP IMSDVEFDEL KLRLKQDGSD IVTEGPRCSL RSRKVYSDLT
201: VDYLKMFLLX XNVPATIVAL GLFFFIDELT GFEVNVFQFP EPFGFIFTYF AALPLILVTA QVVTKAIIND VLILKGPCPN CGTENLSFYG TILSIESGGA
301: TNNVKCANCK TVMVYDSKTR LITLPD

Best Arabidopsis Sequence Match ( AT4G22890.1 )
(BLAST)

001: MGSKMLFSLT SPRLFSAVSR KPSSSFSPSP PSPSSRTQWT QLSPGKSISL RRRVFLLPAK ATTEQSGPVG GDNVDSNVLP YCSINKAEKK TIGEMEQEFL
101: QALQSFYYDG KAIMSNEEFD NLKEELMWEG SSVVMLSSDE QRFLEASMAY VSGNPILNDE EYDKLKLKLK IDGSDIVSEG PRCSLRSKKV YSDLAVDYFK
201: MLLLNVPATV VALGLFFFLD DITGFEITYI MELPEPYSFI FTWFAAVPVI VYLALSITKL IIKDFLILKG PCPNCGTENT SFFGTILSIS SGGKTNTVKC
301: TNCGTAMVYD SGSRLITLPE GSQA

Arabidopsis Description

PGRL1APGR5-LIKE A [Source:UniProtKB/TrEMBL;Acc:A0A178UU76]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.