Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019349.1-P | Field mustard | plastid | 87.96 | 89.06 |
| CDY68977 | Canola | plastid | 87.65 | 88.75 |
| CDX94134 | Canola | plastid | 86.73 | 87.81 |
| Bra013653.1-P | Field mustard | plastid | 82.72 | 84.01 |
| CDY41285 | Canola | plastid | 82.72 | 84.01 |
| CDY10819 | Canola | plastid | 82.1 | 83.39 |
| AT4G11960.1 | Thale cress | plastid | 74.07 | 76.68 |
| Zm00001d034904_P001 | Maize | plastid | 51.23 | 72.49 |
| GSMUA_Achr4P28830_001 | Banana | cytosol, peroxisome, plasma membrane | 62.04 | 71.28 |
| KRH57278 | Soybean | plastid | 70.37 | 71.03 |
| KRH04003 | Soybean | plastid | 72.53 | 70.78 |
| VIT_02s0025g04710.t01 | Wine grape | plastid | 70.99 | 70.55 |
| PGSC0003DMT400032525 | Potato | plastid | 69.44 | 70.53 |
| KRH26378 | Soybean | plasma membrane | 32.1 | 70.27 |
| PGSC0003DMT400058521 | Potato | plastid | 69.14 | 70.0 |
| KRH77457 | Soybean | plastid | 67.28 | 68.99 |
| Solyc08g007770.2.1 | Tomato | plastid | 63.27 | 66.78 |
| Solyc08g080050.2.1 | Tomato | plastid | 63.27 | 66.56 |
| GSMUA_Achr2P12240_001 | Banana | plastid | 64.2 | 65.82 |
| Os03t0857400-01 | Rice | plasma membrane | 64.51 | 64.51 |
| Os08t0526300-02 | Rice | plastid | 64.51 | 63.53 |
| TraesCS5B01G560400.1 | Wheat | plastid | 62.65 | 62.46 |
| Zm00001d034900_P001 | Maize | plastid | 62.04 | 62.42 |
| TraesCS5D01G569800.1 | Wheat | plastid | 62.35 | 62.35 |
| HORVU5Hr1G124210.2 | Barley | plastid | 62.35 | 61.96 |
| TraesCS4A01G319000.1 | Wheat | plastid | 62.04 | 61.85 |
| KXG34948 | Sorghum | plastid | 62.35 | 60.84 |
| Zm00001d019454_P001 | Maize | plastid | 60.8 | 58.81 |
| KXG37086 | Sorghum | plastid | 61.73 | 49.26 |
| Os08t0310500-00 | Rice | plastid | 12.35 | 30.53 |
Protein Annotations
| MapMan:1.1.6.1.2 | EntrezGene:828388 | UniProt:A0A178UU76 | ProteinID:AEE84674.1 | ProteinID:AEE84675.1 | ProteinID:AEE84677.1 |
| ProteinID:AEE84678.1 | ArrayExpress:AT4G22890 | EnsemblPlantsGene:AT4G22890 | RefSeq:AT4G22890 | TAIR:AT4G22890 | RefSeq:AT4G22890-TAIR-G |
| EnsemblPlants:AT4G22890.1 | TAIR:AT4G22890.1 | Unigene:At.2370 | EMBL:BT000905 | ProteinID:CAA19804.1 | ProteinID:CAB79244.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 |
| GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009773 | GO:GO:0009987 |
| GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016730 | GO:GO:0019904 | GO:GO:0042802 |
| GO:GO:0055114 | RefSeq:NP_001078431.1 | RefSeq:NP_001078432.1 | RefSeq:NP_567672.1 | RefSeq:NP_849423.1 | ProteinID:OAO97165.1 |
| Symbol:PGR5-LIKE A | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR31032 | PANTHER:PTHR31032:SF1 | UniProt:Q8H112 | TMHMM:TMhelix | UniParc:UPI00000ADB13 |
| SEG:seg | : | : | : | : | : |
Description
PGRL1APGR5-LIKE A [Source:UniProtKB/TrEMBL;Acc:A0A178UU76]
Coordinates
chr4:+:12006986..12009536
Molecular Weight (calculated)
35723.0 Da
IEP (calculated)
4.918
GRAVY (calculated)
-0.022
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSKMLFSLT SPRLFSAVSR KPSSSFSPSP PSPSSRTQWT QLSPGKSISL RRRVFLLPAK ATTEQSGPVG GDNVDSNVLP YCSINKAEKK TIGEMEQEFL
101: QALQSFYYDG KAIMSNEEFD NLKEELMWEG SSVVMLSSDE QRFLEASMAY VSGNPILNDE EYDKLKLKLK IDGSDIVSEG PRCSLRSKKV YSDLAVDYFK
201: MLLLNVPATV VALGLFFFLD DITGFEITYI MELPEPYSFI FTWFAAVPVI VYLALSITKL IIKDFLILKG PCPNCGTENT SFFGTILSIS SGGKTNTVKC
301: TNCGTAMVYD SGSRLITLPE GSQA
101: QALQSFYYDG KAIMSNEEFD NLKEELMWEG SSVVMLSSDE QRFLEASMAY VSGNPILNDE EYDKLKLKLK IDGSDIVSEG PRCSLRSKKV YSDLAVDYFK
201: MLLLNVPATV VALGLFFFLD DITGFEITYI MELPEPYSFI FTWFAAVPVI VYLALSITKL IIKDFLILKG PCPNCGTENT SFFGTILSIS SGGKTNTVKC
301: TNCGTAMVYD SGSRLITLPE GSQA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.