Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CAA33977 | |
| Os02t0103800-01 | |
| Os06t0107700-01 | |
| Os08t0104600-02 | |
| Os08t0560900-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0526300-02 | Rice | plastid | 64.12 | 25.53 |
| KXG34948 | Sorghum | plastid | 44.27 | 17.47 |
| Zm00001d019454_P001 | Maize | plastid | 38.17 | 14.93 |
| GSMUA_Achr2P12240_001 | Banana | plastid | 32.82 | 13.61 |
| Bra013653.1-P | Field mustard | plastid | 31.3 | 12.85 |
| CDY41285 | Canola | plastid | 31.3 | 12.85 |
| Os03t0857400-01 | Rice | plasma membrane | 31.3 | 12.65 |
| CDY10819 | Canola | plastid | 30.53 | 12.54 |
| AT4G22890.1 | Thale cress | plastid | 30.53 | 12.35 |
| KRH77457 | Soybean | plastid | 29.77 | 12.34 |
| CDY68977 | Canola | plastid | 29.01 | 11.88 |
| CDX94134 | Canola | plastid | 29.01 | 11.88 |
| Bra019349.1-P | Field mustard | plastid | 29.01 | 11.88 |
| VIT_02s0025g04710.t01 | Wine grape | plastid | 29.01 | 11.66 |
| CDX90812 | Canola | plastid | 27.48 | 11.25 |
| Bra000757.1-P | Field mustard | plastid | 27.48 | 11.25 |
| KRH57278 | Soybean | plastid | 27.48 | 11.21 |
| CDY51552 | Canola | plastid | 26.72 | 10.94 |
| KRH04003 | Soybean | plastid | 27.48 | 10.84 |
| GSMUA_Achr4P28830_001 | Banana | cytosol, peroxisome, plasma membrane | 22.9 | 10.64 |
| AT4G11960.1 | Thale cress | plastid | 24.43 | 10.22 |
| Solyc08g007770.2.1 | Tomato | plastid | 23.66 | 10.1 |
| Solyc08g080050.2.1 | Tomato | plastid | 23.66 | 10.06 |
| PGSC0003DMT400032525 | Potato | plastid | 22.9 | 9.4 |
| PGSC0003DMT400058521 | Potato | plastid | 22.9 | 9.38 |
| KRH26378 | Soybean | plasma membrane | 4.58 | 4.05 |
Protein Annotations
| EnsemblPlants:Os08t0310500-00 | EnsemblPlantsGene:Os08g0310500 | PANTHER:PTHR31032 | PANTHER:PTHR31032:SF6 | ProteinID:BAT04845.1 | SEG:seg |
| UniParc:UPI000393ABC3 | UniProt:A0A0P0XE45 | MapMan:35.2 | : | : | : |
Description
Conserved hypothetical protein. (Os08t0310500-00)
Coordinates
chr8:-:13118506..13120672
Molecular Weight (calculated)
14667.4 Da
IEP (calculated)
10.053
GRAVY (calculated)
-0.628
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLLPRPVL PAAAAASTSS SSRCRYRITT SSSARGWSNC QGWRLRHRVW AAHAADQQGG VQQQQQQESE DDVVDSNVLP YCSINRKEKK TIGEMAQEFL
101: SRRCRPVPCP SLLLNPATSY HTYYILTKRG K
101: SRRCRPVPCP SLLLNPATSY HTYYILTKRG K
001: MGSKMLFSLT SPRLFSAVSR KPSSSFSPSP PSPSSRTQWT QLSPGKSISL RRRVFLLPAK ATTEQSGGDN VDSNVLPYCS INKAEKKTIG EMEQEFLQAL
101: QSFYYDGKAI MSNEEFDNLK EELMWEGSSV VMLSSDEQRF LEASMAYVSG NPILNDEEYD KLKLKLKIDG SDIVSEGPRC SLRSKKVYSD LAVDYFKMLL
201: LNVPATVVAL GLFFFLDDIT GFEITYIMEL PEPYSFIFTW FAAVPVIVYL ALSITKLIIK DFLILKGPCP NCGTENTSFF GTILSISSGG KTNTVKCTNC
301: GTAMVYDSGS RLITLPEGSQ A
101: QSFYYDGKAI MSNEEFDNLK EELMWEGSSV VMLSSDEQRF LEASMAYVSG NPILNDEEYD KLKLKLKIDG SDIVSEGPRC SLRSKKVYSD LAVDYFKMLL
201: LNVPATVVAL GLFFFLDDIT GFEITYIMEL PEPYSFIFTW FAAVPVIVYL ALSITKLIIK DFLILKGPCP NCGTENTSFF GTILSISSGG KTNTVKCTNC
301: GTAMVYDSGS RLITLPEGSQ A
Arabidopsis Description
PGRL1APGR5-LIKE A [Source:UniProtKB/TrEMBL;Acc:A0A178UU76]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.