Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G181900.1 | Wheat | endoplasmic reticulum, vacuole | 94.74 | 94.74 |
| TraesCS1D01G295200.1 | Wheat | endoplasmic reticulum, vacuole | 94.74 | 94.74 |
| TraesCS3D01G052700.1 | Wheat | plastid | 94.74 | 94.74 |
| TraesCS5A01G437100.1 | Wheat | endoplasmic reticulum, vacuole | 94.74 | 94.74 |
| ATCG00560.1 | Thale cress | vacuole | 92.11 | 92.11 |
| TraesCS2D01G270500.1 | Wheat | endoplasmic reticulum, vacuole | 92.11 | 92.11 |
| TraesCS2D01G540200.1 | Wheat | endoplasmic reticulum, vacuole | 92.11 | 92.11 |
| TraesCS5D01G009800.1 | Wheat | endoplasmic reticulum, vacuole | 92.11 | 92.11 |
| Solyc04g049240.1.1 | Tomato | cytosol, plasma membrane, plastid | 10.53 | 7.14 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G220800.1 | EnsemblPlantsGene:TraesCS5D01G220800 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009523 | GO:GO:0009539 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0015979 |
| GO:GO:0016020 | HAMAP:MF_01317 | InterPro:PSII_PsbL | InterPro:PSII_PsbL_sf | PANTHER:PTHR33391 | PANTHER:PTHR33391:SF5 |
| PFAM:PD005113 | PFAM:PF02419 | SUPFAM:SSF161017 | TMHMM:TMhelix | MapMan:1.1.1.2.6 | : |
Description
No Description!
Coordinates
chr5D:+:329132837..329132953
Molecular Weight (calculated)
4479.3 Da
IEP (calculated)
3.979
GRAVY (calculated)
0.292
Length
38 amino acids
Sequence
(BLAST)
(BLAST)
1: MTESNPNEQN VELNHTSLYW GLLLIFVLAV LFSNYFFN
1: MTQSNPNEQS VELNRTSLYW GLLLIFVLAV LFSNYFFN
Arabidopsis Description
PSBLPhotosystem II reaction center protein L [Source:UniProtKB/Swiss-Prot;Acc:P60129]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.