Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 1
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AGP50769 | Barley | plastid | 97.37 | 97.37 |
| CAA33963 | Rice | endoplasmic reticulum, vacuole | 97.37 | 97.37 |
| Os03t0667201-00 | Rice | endoplasmic reticulum, vacuole | 97.37 | 97.37 |
| TraesCS1D01G181900.1 | Wheat | endoplasmic reticulum, vacuole | 97.37 | 97.37 |
| TraesCS1D01G295200.1 | Wheat | endoplasmic reticulum, vacuole | 97.37 | 97.37 |
| TraesCS3B01G186500.1 | Wheat | endoplasmic reticulum, vacuole | 97.37 | 97.37 |
| TraesCS3D01G052700.1 | Wheat | plastid | 97.37 | 97.37 |
| TraesCS5A01G437100.1 | Wheat | endoplasmic reticulum, vacuole | 97.37 | 97.37 |
| TraesCS5B01G380100.1 | Wheat | endoplasmic reticulum, vacuole | 97.37 | 97.37 |
| TraesCS1A01G148700.1 | Wheat | endoplasmic reticulum, vacuole | 94.74 | 94.74 |
| TraesCS2D01G270500.1 | Wheat | endoplasmic reticulum, vacuole | 94.74 | 94.74 |
| TraesCS2D01G540200.1 | Wheat | endoplasmic reticulum, vacuole | 94.74 | 94.74 |
| TraesCS5D01G009800.1 | Wheat | endoplasmic reticulum, vacuole | 94.74 | 94.74 |
| TraesCSU01G259300.1 | Wheat | golgi, vacuole | 94.74 | 94.74 |
| TraesCS5D01G220800.1 | Wheat | vacuole | 92.11 | 92.11 |
| Solyc04g049240.1.1 | Tomato | cytosol, plasma membrane, plastid | 10.53 | 7.14 |
Protein Annotations
| MapMan:1.1.1.2.6 | PDB:5MDX | EntrezGene:844751 | UniProt:A0A1B1W4W0 | ProteinID:AAG26976.1 | ProteinID:ANW47805.1 |
| ArrayExpress:ATCG00560 | EnsemblPlantsGene:ATCG00560 | RefSeq:ATCG00560 | TAIR:ATCG00560 | RefSeq:ATCG00560-TAIR-G | EnsemblPlants:ATCG00560.1 |
| TAIR:ATCG00560.1 | ProteinID:BAA84400.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009523 | GO:GO:0009534 | GO:GO:0009535 |
| GO:GO:0009536 | GO:GO:0009539 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 |
| GO:GO:0016021 | HAMAP:MF_01317 | RefSeq:NP_051074.1 | UniProt:P60129 | PFAM:PD005113 | PFAM:PF02419 |
| Symbol:PSBL | InterPro:PSII_PsbL | InterPro:PSII_PsbL_sf | PANTHER:PTHR33391 | PANTHER:PTHR33391:SF5 | SUPFAM:SSF161017 |
| TMHMM:TMhelix | UniParc:UPI000000099C | : | : | : | : |
Description
PSBLPhotosystem II reaction center protein L [Source:UniProtKB/Swiss-Prot;Acc:P60129]
Coordinates
chrPt:-:63804..63920
Molecular Weight (calculated)
4470.4 Da
IEP (calculated)
4.258
GRAVY (calculated)
0.329
Length
38 amino acids
Sequence
(BLAST)
(BLAST)
1: MTQSNPNEQS VELNRTSLYW GLLLIFVLAV LFSNYFFN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.