Factsheet for TraesCS1D01G376000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G078410.3	Barley	cytosol, plasma membrane	98.99	91.78
TraesCS1A01G369800.1	Wheat	plastid	99.8	88.55
TraesCS1B01G388900.1	Wheat	plastid	99.6	88.37
GSMUA_Achr7P17230_001	Banana	cytosol	85.69	85.51
Os05t0549100-02	Rice	plastid	91.94	81.57
KXG22466	Sorghum	plastid	91.53	80.78
PGSC0003DMT400016911	Potato	plasma membrane	77.82	77.98
Zm00001d038894_P002	Maize	plastid	89.31	74.96
VIT_01s0011g03010.t01	Wine grape	plastid	80.44	69.63
CDY33589	Canola	plastid	79.03	69.63
AT1G68830.1	Thale cress	plastid	78.83	69.57
Solyc12g021280.1.1	Tomato	plastid	77.62	69.37
Bra004340.1-P	Field mustard	plastid	78.43	69.22
CDX95985	Canola	plastid	78.43	69.09
KRH75488	Soybean	plastid	80.04	68.8
KRH70612	Soybean	plastid	79.84	68.16
TraesCS1D01G301100.1	Wheat	plastid	31.25	25.96

Protein Annotations

MapMan:1.1.1.4.1.1	Gene3D:1.10.510.10	MapMan:18.4.3.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006464	GO:GO:0006468
GO:GO:0007623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009579
GO:GO:0009628	GO:GO:0009643	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0042548	GO:GO:0042651	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11584	PANTHER:PTHR11584:SF316
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS1D01G376000	EnsemblPlants:TraesCS1D01G376000.1	TIGR:cd14013	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:-:452502475..452506168

Molecular Weight (calculated)

55849.3 Da

IEP (calculated)

9.092

GRAVY (calculated)

-0.234

Length

496 amino acids

Sequence
(BLAST)

001: MACGDVIYRS TLPHNDGLTI TAPGVALALA AASYLWATPG VAPGFFDMFV LAFAERLFRP TFRKDDFVPG KKLGEGAFGV VYKASLADPK AAEKQGDVVV
101: KKATEYGAVE IWMNERVRRA CASSCADFLY GFRESKTKGK GEEYWLIWRY EGEDTLSALM QSKEFPYNVE TKILGNVQDL PKGIARENKI VQTVMGQLLF
201: ALDGLHSTGI VHRDIKPQNV IFSEESRTFK IIDLGAAADL RVGINYIPKE FLLDPRYAAP EQYIMSTQTP SAPSAPVATA LSPVLWQLNL PDRFDIYSLG
301: LIYLQMAFPA LRTDSSLIQF NRQLKRCNYD LEAWRNLVEP RATPDLRRGF DILDLDGGIG WELLTSMVRY KARQRTSAKA ALAHPYFNSE GLLGLSVMQN
401: LRLQLFRATQ KDYSEAARWI IGLMAKSGTE EGGGFTEAQL QELREIKPKK DSAQRNVLAS MLRVQRKIVR TISESMDELT SQRKSIWWSR WIPREE

Best Arabidopsis Sequence Match ( AT1G68830.1 )
(BLAST)

001: MATISPGGAY IGTPSPFLGK KLKPFSLTSP ILSFKPTVKL NSSCRAQLID TVHNLFIGVG VGLPCTVMEC GDMIYRSTLP KSNGLTITAP GVALALTALS
101: YLWATPGVAP GFFDMFVLAF VERLFRPTFR KDDFVVGKKL GEGSFGVVYK VSLSKKRSNE EGEYVLKKAT EYGAVEIWMN ERVRRACGNS CADFVYGFLD
201: KSSKKGPEYW LLWKYEGEST LAGLMQSKEF PYNVETIILG KVQDLPKGLE RENKIIQTIM RQLLFALDGL HSTGIIHRDV KPQNIIFSEG SRSFKIIDLG
301: AAADLRVGIN YIPKEFLLDP RYAAPEQYIM STQTPSAPSA PVAAALSPVL WQMNLPDRFD IYSIGLIFLQ MAFPSLRSDS NLIQFNRQLK RCDYDLTAWR
401: KLVEPRASAD LRRGFELVDL DGGIGWELLT SMVRYKARQR ISAKAALAHP YFDRQGLLAL SVMQNLRMQY FRATQQDYSE AANWVIQLMA KNGTEKDGGF
501: TETQLQELRE KEPRKKANAQ RNALASALRL QRKLVKTVTE TIDEISDGRK TVWWNRWIPR EE

Arabidopsis Description

STN7Serine/threonine-protein kinase STN7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S713]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.