Factsheet for VIT_01s0011g03010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400016911	Potato	plasma membrane	72.77	84.24
GSMUA_Achr7P17230_001	Banana	cytosol	72.95	84.1
TraesCS1D01G376000.1	Wheat	cytosol	69.63	80.44
Solyc12g021280.1.1	Tomato	plastid	76.09	78.56
HORVU1Hr1G078410.3	Barley	cytosol, plasma membrane	71.55	76.64
KRH75488	Soybean	plastid	76.79	76.26
AT1G68830.1	Thale cress	plastid	74.17	75.62
KRH70612	Soybean	plastid	76.44	75.39
CDY33589	Canola	plastid	73.82	75.13
Bra004340.1-P	Field mustard	plastid	73.47	74.91
CDX95985	Canola	plastid	73.47	74.78
TraesCS1B01G388900.1	Wheat	plastid	72.6	74.42
TraesCS1A01G369800.1	Wheat	plastid	72.43	74.24
KXG22466	Sorghum	plastid	72.08	73.49
Os05t0549100-02	Rice	plastid	71.38	73.17
Zm00001d038894_P002	Maize	plastid	72.08	69.88
VIT_08s0058g01450.t01	Wine grape	cytosol	27.05	39.64
VIT_08s0058g01470.t01	Wine grape	cytosol	4.01	21.9

Protein Annotations

MapMan:1.1.1.4.1.1	Gene3D:1.10.510.10	EntrezGene:100255959	wikigene:100255959	MapMan:18.4.3.8	Gene3D:3.30.200.20
EMBL:AM450640	ProteinID:CAN65372	ProteinID:CAN65372.1	ProteinID:CCB50942	ProteinID:CCB50942.1	UniProt:F6HF12
EMBL:FN595752	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006091	GO:GO:0006464	GO:GO:0006468	GO:GO:0007623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009579	GO:GO:0009628	GO:GO:0009643	GO:GO:0009987
GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0042548	GO:GO:0042651	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100255959	wikigene:LOC100255959
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11584	PANTHER:PTHR11584:SF316
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC55098
TIGR:TC62341	TMHMM:TMhelix	UniParc:UPI00015C7C5A	ArrayExpress:VIT_01s0011g03010	EnsemblPlantsGene:VIT_01s0011g03010	EnsemblPlants:VIT_01s0011g03010.t01
unigene:Vvi.4008	RefSeq:XP_002281563	RefSeq:XP_002281563.1	RefSeq:XP_003631227	RefSeq:XP_003631227.1	SEG:seg

Description

No Description!

Coordinates

chr1:-:2692236..2698927

Molecular Weight (calculated)

64304.2 Da

IEP (calculated)

10.147

GRAVY (calculated)

-0.155

Length

573 amino acids

Sequence
(BLAST)

001: MATIATRVVE GLGLGHAKLH AFSPKHPSPF LGKKLRSQSL SLPSKKAVSN LVCAAGGGFF NLVHDVFLGV GVGLPCTVME CGDIIYRSTL PRSNGLTLTA
101: PGAILALGAL SYLWATPGVA PGFFDMFVLA FVERLFRPSF KKEDFVLGKK LGEGAFGVVY RVSLAKKPGA KEGDLVLKKA TEYGAVEIWM NERARRACAN
201: SCAYFVYGFL ESSSKKGSEY WLLWRYEGES TLTDLMLSKE FPYNVESMIL GEVPDLPKGL ERENKIIQTI MRQLLFALDS LHSTGIVHRD IKPQNIIFSE
301: GSRTFKIIDL GAAADLRVGI NYIPKEFLLD PRYAAPEQYI MSTQTPSAPS APVATALSPV LWQMNLPDRF DIYSAGLIFL QMAFPSLRTD SSLIQFNRQL
401: KRCEYDLVAW RKTVEPRASP DLRRGFELLD LDGGIGWELL TSMVRFKARR RTSAKAALAH PYFDREGLSV LSLTQKLRLQ LFRTTQQDYG EAAKWIIRLM
501: AKSGTKQDGG FTEAQLQELR EIQPKKKGNS QRNALASVLR LQRKIVRTLN ESMDDLNRRR KSLWWSRWIP REE

Best Arabidopsis Sequence Match ( AT1G68830.1 )
(BLAST)

001: MATISPGGAY IGTPSPFLGK KLKPFSLTSP ILSFKPTVKL NSSCRAQLID TVHNLFIGVG VGLPCTVMEC GDMIYRSTLP KSNGLTITAP GVALALTALS
101: YLWATPGVAP GFFDMFVLAF VERLFRPTFR KDDFVVGKKL GEGSFGVVYK VSLSKKRSNE EGEYVLKKAT EYGAVEIWMN ERVRRACGNS CADFVYGFLD
201: KSSKKGPEYW LLWKYEGEST LAGLMQSKEF PYNVETIILG KVQDLPKGLE RENKIIQTIM RQLLFALDGL HSTGIIHRDV KPQNIIFSEG SRSFKIIDLG
301: AAADLRVGIN YIPKEFLLDP RYAAPEQYIM STQTPSAPSA PVAAALSPVL WQMNLPDRFD IYSIGLIFLQ MAFPSLRSDS NLIQFNRQLK RCDYDLTAWR
401: KLVEPRASAD LRRGFELVDL DGGIGWELLT SMVRYKARQR ISAKAALAHP YFDRQGLLAL SVMQNLRMQY FRATQQDYSE AANWVIQLMA KNGTEKDGGF
501: TETQLQELRE KEPRKKANAQ RNALASALRL QRKLVKTVTE TIDEISDGRK TVWWNRWIPR EE

Arabidopsis Description

STN7Serine/threonine-protein kinase STN7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S713]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.