Factsheet for PGSC0003DMT400016911

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g021280.1.1	Tomato	plastid	98.99	88.29
GSMUA_Achr7P17230_001	Banana	cytosol	81.41	81.09
TraesCS1D01G376000.1	Wheat	cytosol	77.98	77.82
KRH75488	Soybean	plastid	87.27	74.87
KRH70612	Soybean	plastid	86.46	73.67
VIT_01s0011g03010.t01	Wine grape	plastid	84.24	72.77
Bra004340.1-P	Field mustard	plastid	81.82	72.06
CDX95985	Canola	plastid	81.82	71.94
CDY33589	Canola	plastid	81.82	71.94
HORVU1Hr1G078410.3	Barley	cytosol, plasma membrane	77.58	71.78
AT1G68830.1	Thale cress	plastid	81.41	71.71
TraesCS1B01G388900.1	Wheat	plastid	78.18	69.23
KXG22466	Sorghum	plastid	78.38	69.04
TraesCS1A01G369800.1	Wheat	plastid	77.78	68.87
Os05t0549100-02	Rice	plastid	77.37	68.52
Zm00001d038894_P002	Maize	plastid	77.98	65.31
PGSC0003DMT400021664	Potato	plastid	32.53	32.2

Protein Annotations

MapMan:1.1.1.4.1.1	Gene3D:1.10.510.10	MapMan:18.4.3.8	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006464
GO:GO:0006468	GO:GO:0007623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009579	GO:GO:0009628	GO:GO:0009643	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0042548	GO:GO:0042651	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1A8C3	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400006613	PGSC:PGSC0003DMG400006613	EnsemblPlants:PGSC0003DMT400016911
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11584	PANTHER:PTHR11584:SF316	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002950EB3
SEG:seg	:	:	:	:	:

Description

Serine/threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400006613]

Coordinates

chr12:+:45970429..45977330

Molecular Weight (calculated)

56302.1 Da

IEP (calculated)

9.766

GRAVY (calculated)

-0.213

Length

495 amino acids

Sequence
(BLAST)

001: MECGDIIYRS TLPKSNGITV TVPGIILALG TLSYLWATPG VAPGFFDMFV LAFLERFFRP IYKKDDIVLG KKLGEGSFGS VYRVSLARKP SSKPADLVLK
101: KATEYGAVEI WMNERVRRAC ANSCADFLYG FRETSSKKGA EYWLLWRFEG EATLADLMQS RDFPYNVESL ILREVQDLPK GLDRENRIIL TIMRQLLFAL
201: DGLHSTGIVH RDIKPQNIIF SEGSRAFKII DLGAAADLRV GINYIPKEFL LDPRYAAPEQ YIMSTQTPSA PSAPVATALS PVLWQLNLPD RFDIYSIGLI
301: FLQMAFPGLR SDNSLIQFNR QLKRCDYDLV SWRQSVEPRA GPELRKGFEL LDLDGGIGWE LLTSMVRFKA RQRISAKTAL AHPYFDREGL LALSFIQNLK
401: LQFFRATQQD YSEAANWVVQ LMAKSGTEQD GGFTEAQLQQ LREIKPKKKS NAQRNALASA LRLQRKIIKT LNESMDDLSN KRKSLWWSRW IPREE

Best Arabidopsis Sequence Match ( AT1G68830.1 )
(BLAST)

001: MATISPGGAY IGTPSPFLGK KLKPFSLTSP ILSFKPTVKL NSSCRAQLID TVHNLFIGVG VGLPCTVMEC GDMIYRSTLP KSNGLTITAP GVALALTALS
101: YLWATPGVAP GFFDMFVLAF VERLFRPTFR KDDFVVGKKL GEGSFGVVYK VSLSKKRSNE EGEYVLKKAT EYGAVEIWMN ERVRRACGNS CADFVYGFLD
201: KSSKKGPEYW LLWKYEGEST LAGLMQSKEF PYNVETIILG KVQDLPKGLE RENKIIQTIM RQLLFALDGL HSTGIIHRDV KPQNIIFSEG SRSFKIIDLG
301: AAADLRVGIN YIPKEFLLDP RYAAPEQYIM STQTPSAPSA PVAAALSPVL WQMNLPDRFD IYSIGLIFLQ MAFPSLRSDS NLIQFNRQLK RCDYDLTAWR
401: KLVEPRASAD LRRGFELVDL DGGIGWELLT SMVRYKARQR ISAKAALAHP YFDRQGLLAL SVMQNLRMQY FRATQQDYSE AANWVIQLMA KNGTEKDGGF
501: TETQLQELRE KEPRKKANAQ RNALASALRL QRKLVKTVTE TIDEISDGRK TVWWNRWIPR EE

Arabidopsis Description

STN7Serine/threonine-protein kinase STN7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S713]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.