CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95985	Canola	plastid	98.05	98.05
AT1G68830.1	Thale cress	plastid	92.01	92.17
PGSC0003DMT400016911	Potato	plasma membrane	71.94	81.82
GSMUA_Achr7P17230_001	Banana	cytosol	70.69	80.08
TraesCS1D01G376000.1	Wheat	cytosol	69.63	79.03
Solyc12g021280.1.1	Tomato	plastid	75.84	76.94
HORVU1Hr1G078410.3	Barley	cytosol, plasma membrane	71.76	75.51
KRH75488	Soybean	plastid	76.02	74.18
VIT_01s0011g03010.t01	Wine grape	plastid	75.13	73.82
KRH70612	Soybean	plastid	76.02	73.67
TraesCS1B01G388900.1	Wheat	plastid	72.11	72.63
Os05t0549100-02	Rice	plastid	71.94	72.45
TraesCS1A01G369800.1	Wheat	plastid	71.76	72.27
KXG22466	Sorghum	plastid	71.94	72.06
Zm00001d038894_P002	Maize	plastid	71.4	68.02
CDY11174	Canola	plastid	30.02	35.81
CDY61602	Canola	plastid	29.66	35.38

Protein Annotations

MapMan:1.1.1.4.1.1	Gene3D:1.10.510.10	MapMan:18.4.3.8	Gene3D:3.30.200.20	GO:A0A078H7Y4	UniProt:A0A078H7Y4
EnsemblPlants:CDY33589	ProteinID:CDY33589	ProteinID:CDY33589.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00054883001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR11584	PANTHER:PTHR11584:SF316	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE4650	SEG:seg	:	:	:

Description

BnaC06g29630DBnaC06g29630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7Y4]

Coordinates

chrLK032317:+:312855..315857

Molecular Weight (calculated)

63277.7 Da

IEP (calculated)

9.799

GRAVY (calculated)

-0.178

Length

563 amino acids

Sequence
(BLAST)

001: MATISPGGAY IGTPTPFLGK KLKPFSLNQT ISTSKPTVNK LCRSHLNLID AVHNLFLGVG VGLPCTVMEC GDMIYRSTLP KSDGLTITAP GVALALTALS
101: YLWATPGVAP GFFDMFVLAF VERLFRPTFR KDDFVLGKKL GEGSFGVVYR ASLSKKRAND DGEYVVKKAT EYGAVEIWMN ERVRRACGNS CADFVYGFLE
201: KSSKKGPEYW LLWKYEGEST LAGLLQSKDF PYNVETIILG KVQDLPKGLE RENIIIQTIM RQLLFALDGL HSTGIVHRDV KPQNIIFSEA GSRAFKIIDL
301: GAAADLRVGI NYIPKEFLLD PRYAAPEQYI MSTQTPSAPS APVAAALSPV LWQMNLPDRF DIYSIGLIFL QMAFPSLRSD SNLIQFNRQL KRCDYDLTAW
401: RKLVEPRASP DLRKGFELLD LDGRIGWELL TSMVRFKARQ RISAKAALAH PYFDRQGLLA LSVMQNLRMQ YFRATQQDYS EAANWVIQLM ARSGTEKDGG
501: FTETQLQELR EKEPRKKASA QRNALASALR LKRKLVKTVA ESIDEIADGR KTVWWNRWIP REE

Best Arabidopsis Sequence Match ( AT1G68830.1 )
(BLAST)

001: MATISPGGAY IGTPSPFLGK KLKPFSLTSP ILSFKPTVKL NSSCRAQLID TVHNLFIGVG VGLPCTVMEC GDMIYRSTLP KSNGLTITAP GVALALTALS
101: YLWATPGVAP GFFDMFVLAF VERLFRPTFR KDDFVVGKKL GEGSFGVVYK VSLSKKRSNE EGEYVLKKAT EYGAVEIWMN ERVRRACGNS CADFVYGFLD
201: KSSKKGPEYW LLWKYEGEST LAGLMQSKEF PYNVETIILG KVQDLPKGLE RENKIIQTIM RQLLFALDGL HSTGIIHRDV KPQNIIFSEG SRSFKIIDLG
301: AAADLRVGIN YIPKEFLLDP RYAAPEQYIM STQTPSAPSA PVAAALSPVL WQMNLPDRFD IYSIGLIFLQ MAFPSLRSDS NLIQFNRQLK RCDYDLTAWR
401: KLVEPRASAD LRRGFELVDL DGGIGWELLT SMVRYKARQR ISAKAALAHP YFDRQGLLAL SVMQNLRMQY FRATQQDYSE AANWVIQLMA KNGTEKDGGF
501: TETQLQELRE KEPRKKANAQ RNALASALRL QRKLVKTVTE TIDEISDGRK TVWWNRWIPR EE

Arabidopsis Description

STN7Serine/threonine-protein kinase STN7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S713]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.