CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11174	Canola	plastid	88.14	88.14
VIT_08s0058g01450.t01	Wine grape	cytosol	65.68	79.28
AT5G01920.1	Thale cress	plastid	78.6	74.95
KRH64878	Soybean	plastid	69.7	66.2
KRH09551	Soybean	nucleus	69.92	65.61
Solyc10g085680.1.1	Tomato	plastid	68.22	64.79
PGSC0003DMT400021664	Potato	plastid	68.43	64.6
KRH00472	Soybean	plastid	66.1	62.15
OQU78190	Sorghum	plastid	61.65	50.52
Os05t0480000-01	Rice	plastid	60.81	48.56
TraesCS1B01G311200.1	Wheat	plastid	60.81	48.07
TraesCS1A01G301400.1	Wheat	plastid	60.38	47.9
GSMUA_Achr7P22000_001	Banana	extracellular	63.77	47.4
TraesCS1D01G301100.1	Wheat	plastid	59.75	47.24
HORVU1Hr1G069560.1	Barley	plastid	61.02	45.86
CDX95985	Canola	plastid	35.38	29.66
CDY33589	Canola	plastid	35.38	29.66
Zm00001d038485_P001	Maize	plastid	61.86	23.84

Protein Annotations

MapMan:1.1.1.4.1.2	Gene3D:1.10.510.10	MapMan:18.4.3.8	Gene3D:3.30.200.20	GO:A0A078J8A7	UniProt:A0A078J8A7
EnsemblPlants:CDY61602	ProteinID:CDY61602	ProteinID:CDY61602.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00034093001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR11584	PANTHER:PTHR11584:SF316	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EDC201	SEG:seg	:	:	:	:

Description

BnaC03g71310DBnaC03g71310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8A7]

Coordinates

chrLK034016:+:2129..3768

Molecular Weight (calculated)

52948.2 Da

IEP (calculated)

10.119

GRAVY (calculated)

-0.122

Length

472 amino acids

Sequence
(BLAST)

001: MASFLLSPVT SGSFPWHLKC GFSPHTRLSS LHKNRLRCSF SPEDIPVDFV GQSLSHYLPA FNDTQKWASL GLVWFYLTAR PGVLVGAIDA YLLAPLQLGL
101: DTLIGTRRFK RSDFLVTEKL GEGSFGVVYS GVLLPKNSSR LMNKATLKSL VGEEFKERVI LKQVKLGVRG AQEFGEFEEW FNYRLSRAAP DTCAEFLGSF
201: VADKTNTMFT KGGKWLVWRF EGDRDLADYM KDRTFPSNLE SIMFGRVLQG VESVKRRALI IKQIMRQIIT SLRKIHDTGI VHRDVKPANL VVTKKGQIKL
301: IDFGAAADLR IGKNYIPQRT LLDPDYSPPE LYVLPEQTPS PPPEPIAALL SPILWQLNSP DLFDMYSAGI VLLQMAVPSI RSSAGLKNFN LEIKSLEYDL
401: NRWRDRTRTR PDLTILDLDS GTGWDLVTKL ISERGSLRRG RLSAAAALRH PYFFLGGDQA AAVLSKLSFS SK

Best Arabidopsis Sequence Match ( AT5G01920.2 )
(BLAST)

001: MASLLSPATP TATSAAFHSC STAGFSTPTH ISSQNSSLSL LSRRGCMMRC SFSPQDIPVD SLSHLPPFLD FQNSLATFSD TQKWGFFVSA GIVWFYLTAR
101: PGVLIGAIDA YLLAPLQLGL DTLIGRRLKR SDFLVTEKLG EGSFGVVYAG VLLPKNSTLV DDVRVSKARA KAMDFTGEFK QRVILKKVKV GVRGAEEFGE
201: YEEWFNYRLS RAAPDTCAEF LGSFVADKTN TMFTKGGKWL VWRFEGDRDL ADYMKDRSFP SNLESIMFGR VLQGVESVKR RALIIKQIMR QIITSLRKIH
301: GTGIVHRDVK PANLVVTKKG QIKLIDFGAA ADLRIGKNYI PERTLLDPDY CPPELYVLPE ETPSPPPEPI AALLSPILWQ LNSPDLFDMY SAGIVLLQMA
401: VPTLRSTAGL KNFNLEIKSV EYDLNRWRER TRTRPDLSIL DLDSGRGWDL VTKLISERGS LRRGRLSAAA ALRHPYFLLG GDQAAAVLSK LSFSK

Arabidopsis Description

STN8Serine/threonine-protein kinase STN8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.