CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0058g01450.t01	Wine grape	cytosol	62.55	80.31
KRH64878	Soybean	plastid	72.71	73.44
KRH09551	Soybean	nucleus	73.11	72.96
CDY11174	Canola	plastid	63.74	67.8
Bra005663.1-P	Field mustard	plastid	63.55	67.58
AT5G01920.1	Thale cress	plastid	65.94	66.87
CDY61602	Canola	plastid	62.15	66.1
Solyc10g085680.1.1	Tomato	plastid	64.14	64.79
PGSC0003DMT400021664	Potato	plastid	63.55	63.8
OQU78190	Sorghum	plastid	58.76	51.22
Os05t0480000-01	Rice	plastid	58.17	49.41
GSMUA_Achr7P22000_001	Banana	extracellular	60.76	48.03
TraesCS1B01G311200.1	Wheat	plastid	56.97	47.91
TraesCS1D01G301100.1	Wheat	plastid	56.77	47.74
TraesCS1A01G301400.1	Wheat	plastid	56.57	47.73
HORVU1Hr1G069560.1	Barley	plastid	56.57	45.22
KRH75488	Soybean	plastid	33.47	29.12
KRH70612	Soybean	plastid	33.47	28.92
Zm00001d038485_P001	Maize	plastid	58.96	24.16

Protein Annotations

MapMan:1.1.1.4.1.2	Gene3D:1.10.510.10	EntrezGene:100795624	MapMan:18.4.3.8	Gene3D:3.30.200.20	EMBL:ACUP02011451
EnsemblPlantsGene:GLYMA_18G215500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	UniProt:I1N3A4	InterPro:IPR000719	ProteinID:KRH00471.1
EnsemblPlants:KRH00472	ProteinID:KRH00472	ProteinID:KRH00472.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR11584	PANTHER:PTHR11584:SF316	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233E9A1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:50262516..50267358

Molecular Weight (calculated)

55997.7 Da

IEP (calculated)

10.047

GRAVY (calculated)

-0.143

Length

502 amino acids

Sequence
(BLAST)

001: MASLLSTTAT TLQHNHTICF SPVKPTTPNT IPFSTNRCFK NNSAKCNAFF DKFPKDLLET TFHLDQFPVF QSVIVKFQNV TEDLSDVQRW GLGILAGLTW
101: AYFTARPGVL VGAIDAFLLA PIQLVLDSLS GRRNLKRTDF LVGDKLGEGS FGVVYSGVLV PRNVDVQEWM QKSGRDKVAK LDAKSKDKVV LKKVKVGIEG
201: AEEFGDFEEW FNYRLSRAAP ETCAKFLGSF VADKTNSQFT KGGKWLVWKF EGGRSLADYM ADQSFPSNLE SIMFGRVLQG VDSSKRNALI IKQIMRQIIT
301: SLKKIHDIGI VHRDVKPANL VVTKRGQIKL IDFGAATDLR IGKNYVPNRT PLDRDYCPPE LYVLPEETLS LPPEPIAAFL SPILWQLNSP DLFDMYSAGI
401: VLLQMAIPTL RSPAALKNFN LEIRTCGYDL NKWRASTRMR SDFQILDSDS SRGWDLATKL ISKRGSQRRG RLSAAAALRH PYFLLGGDQA AAVLSKLSLS
501: TK

Best Arabidopsis Sequence Match ( AT5G01920.2 )
(BLAST)

001: MASLLSPATP TATSAAFHSC STAGFSTPTH ISSQNSSLSL LSRRGCMMRC SFSPQDIPVD SLSHLPPFLD FQNSLATFSD TQKWGFFVSA GIVWFYLTAR
101: PGVLIGAIDA YLLAPLQLGL DTLIGRRLKR SDFLVTEKLG EGSFGVVYAG VLLPKNSTLV DDVRVSKARA KAMDFTGEFK QRVILKKVKV GVRGAEEFGE
201: YEEWFNYRLS RAAPDTCAEF LGSFVADKTN TMFTKGGKWL VWRFEGDRDL ADYMKDRSFP SNLESIMFGR VLQGVESVKR RALIIKQIMR QIITSLRKIH
301: GTGIVHRDVK PANLVVTKKG QIKLIDFGAA ADLRIGKNYI PERTLLDPDY CPPELYVLPE ETPSPPPEPI AALLSPILWQ LNSPDLFDMY SAGIVLLQMA
401: VPTLRSTAGL KNFNLEIKSV EYDLNRWRER TRTRPDLSIL DLDSGRGWDL VTKLISERGS LRRGRLSAAA ALRHPYFLLG GDQAAAVLSK LSFSK

Arabidopsis Description

STN8Serine/threonine-protein kinase STN8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.