Factsheet for TraesCS1D01G301100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G311200.1	Wheat	plastid	96.98	96.98
TraesCS1A01G301400.1	Wheat	plastid	91.62	91.93
HORVU1Hr1G069560.1	Barley	plastid	90.12	85.67
VIT_08s0058g01450.t01	Wine grape	cytosol	47.91	73.15
Os05t0480000-01	Rice	plastid	72.03	72.76
OQU78190	Sorghum	plastid	66.67	69.1
Bra005663.1-P	Field mustard	plastid	48.74	61.65
CDY11174	Canola	plastid	48.74	61.65
KRH09551	Soybean	nucleus	50.59	60.04
KRH64878	Soybean	plastid	49.92	59.96
CDY61602	Canola	plastid	47.24	59.75
Solyc10g085680.1.1	Tomato	plastid	49.58	59.56
PGSC0003DMT400021664	Potato	plastid	49.58	59.2
AT5G01920.1	Thale cress	plastid	47.91	57.78
KRH00472	Soybean	plastid	47.74	56.77
GSMUA_Achr7P22000_001	Banana	extracellular	52.26	49.13
Zm00001d038485_P001	Maize	plastid	67.0	32.65
TraesCS1D01G376000.1	Wheat	cytosol	25.96	31.25

Protein Annotations

MapMan:1.1.1.4.1.2	Gene3D:1.10.510.10	MapMan:18.4.3.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11584
PANTHER:PTHR11584:SF316	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS1D01G301100
EnsemblPlants:TraesCS1D01G301100.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:398972704..398976532

Molecular Weight (calculated)

63915.5 Da

IEP (calculated)

6.863

GRAVY (calculated)

-0.103

Length

597 amino acids

Sequence
(BLAST)

001: MASSSLLPPP TFANKHHALL HPHGARHRLI RCGAAPTDGG AGDELLSGAL HLGRPDPVVA TVVSDTGTDG WGDLFTELKR SLQADSSDPA ASDAASIGAG
101: AGAAVPDGLL SSPLAGEAAN ANAALVVPDG ALTSAPDSAT DGVGAAVDAI PDELLSALHL DASSPAVRVA DDALSRMEEL TAGMNEAERW ALFGVVAVTW
201: LYLTARPGVL SGAVDTYVFA PLQQALDTLL GRRSLKMSDF VVGERIGEGS FGVVYSGAVV PRGGPAVEER AGRAKTKLQL DDRYKEKVIL KKIKVGTVGA
301: KECGDYEEWF NYRVARAAPE SCADFMGSFV ADKTKSEFVK GGKWLVWKFE GDRTLGNYVT DRGFPANLEP LMFGRALRGV DALTRAALVV KQVMRQLVTS
401: LRRIHDTGIV HRDIKPSNLV VTRRGQVKLI DFGAATDLRI GKNYVPDRTL LDPDYCPPEL YVLPEETPTP PAEPIAAILS PILWQLNSPD LFDMYSAGIV
501: LMQMATPALR SPSGLKNFNS ELKAAGYDLN RWRETTRRRP DLQILDLDSG RGWDLATKLI AQREKGRLSA AAALRHPYFL LGGDRAAAVL SKLQLTK

Best Arabidopsis Sequence Match ( AT5G01920.2 )
(BLAST)

001: MASLLSPATP TATSAAFHSC STAGFSTPTH ISSQNSSLSL LSRRGCMMRC SFSPQDIPVD SLSHLPPFLD FQNSLATFSD TQKWGFFVSA GIVWFYLTAR
101: PGVLIGAIDA YLLAPLQLGL DTLIGRRLKR SDFLVTEKLG EGSFGVVYAG VLLPKNSTLV DDVRVSKARA KAMDFTGEFK QRVILKKVKV GVRGAEEFGE
201: YEEWFNYRLS RAAPDTCAEF LGSFVADKTN TMFTKGGKWL VWRFEGDRDL ADYMKDRSFP SNLESIMFGR VLQGVESVKR RALIIKQIMR QIITSLRKIH
301: GTGIVHRDVK PANLVVTKKG QIKLIDFGAA ADLRIGKNYI PERTLLDPDY CPPELYVLPE ETPSPPPEPI AALLSPILWQ LNSPDLFDMY SAGIVLLQMA
401: VPTLRSTAGL KNFNLEIKSV EYDLNRWRER TRTRPDLSIL DLDSGRGWDL VTKLISERGS LRRGRLSAAA ALRHPYFLLG GDQAAAVLSK LSFSK

Arabidopsis Description

STN8Serine/threonine-protein kinase STN8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.