CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2
vacuole 1
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09551	Soybean	nucleus	87.12	86.08
VIT_08s0058g01450.t01	Wine grape	cytosol	67.0	85.17
KRH00472	Soybean	plastid	73.44	72.71
CDY11174	Canola	plastid	68.21	71.82
Bra005663.1-P	Field mustard	plastid	67.81	71.4
CDY61602	Canola	plastid	66.2	69.7
AT5G01920.1	Thale cress	plastid	69.22	69.49
Solyc10g085680.1.1	Tomato	plastid	65.79	65.79
PGSC0003DMT400021664	Potato	plastid	65.39	65.0
OQU78190	Sorghum	plastid	61.77	53.3
Os05t0480000-01	Rice	plastid	61.37	51.61
TraesCS1B01G311200.1	Wheat	plastid	60.76	50.59
TraesCS1A01G301400.1	Wheat	plastid	60.36	50.42
TraesCS1D01G301100.1	Wheat	plastid	59.96	49.92
GSMUA_Achr7P22000_001	Banana	extracellular	63.18	49.45
HORVU1Hr1G069560.1	Barley	plastid	60.97	48.25
KRH70612	Soybean	plastid	35.61	30.46
KRH75488	Soybean	plastid	34.81	29.98
Zm00001d038485_P001	Maize	plastid	61.77	25.06

Protein Annotations

MapMan:1.1.1.4.1.2	Gene3D:1.10.510.10	EntrezGene:100786843	MapMan:18.4.3.8	Gene3D:3.30.200.20	EMBL:ACUP02001297
EnsemblPlantsGene:GLYMA_03G002200	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	UniProt:K7KBW0	EnsemblPlants:KRH64878
ProteinID:KRH64878	ProteinID:KRH64878.1	ProteinID:KRH64879.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR11584	PANTHER:PTHR11584:SF316	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233A03F	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:214631..219469

Molecular Weight (calculated)

55435.0 Da

IEP (calculated)

9.957

GRAVY (calculated)

-0.225

Length

497 amino acids

Sequence
(BLAST)

001: MASLLLPPTA TSSTLKHNNQ ILKLKPNNNA HATCNVFLSN SNHYRFNSAK CHALFDDVAK GLLESSSVGV DQFQRVTEGL SDMQRWVFLV FGGLTWIYLT
101: ARPGVLVGAI DAYLLAPLQL GLDNLSGRRN LKRSDFVVGD KLGEGSFGVV YSGVLLPKNV DVDVLQKRGR AKTTQLDAKS KDKVILKKVK VGIQGAEEFG
201: DYEEWFNYRL SRAAPETCAD FLGTFVADQT NSQFTKGGKW LVWKFEGDRT LADYMKDRNF PSNLESVMFG RVLQGVDSSK RNALIIKQIM RQIITSLRKI
301: HDTGIVHRDV KPANLVVTKR GQIKLIDFGA ATDLRIGKNY VPNRTLLDPD YCPPELYVLP EETPSPPPEP IAAFLSPVLW QLNSPDLFDM YSAGIVLLQM
401: AIPSLRSPAA LKNFNLELKT CGYDMKKWRD YTRLRPDLQI LDSESSRGWD LATKLVSERG SLRRGRLSAA AALRHPYFLL GGDQAAAVLS KLNLNRK

Best Arabidopsis Sequence Match ( AT5G01920.2 )
(BLAST)

001: MASLLSPATP TATSAAFHSC STAGFSTPTH ISSQNSSLSL LSRRGCMMRC SFSPQDIPVD SLSHLPPFLD FQNSLATFSD TQKWGFFVSA GIVWFYLTAR
101: PGVLIGAIDA YLLAPLQLGL DTLIGRRLKR SDFLVTEKLG EGSFGVVYAG VLLPKNSTLV DDVRVSKARA KAMDFTGEFK QRVILKKVKV GVRGAEEFGE
201: YEEWFNYRLS RAAPDTCAEF LGSFVADKTN TMFTKGGKWL VWRFEGDRDL ADYMKDRSFP SNLESIMFGR VLQGVESVKR RALIIKQIMR QIITSLRKIH
301: GTGIVHRDVK PANLVVTKKG QIKLIDFGAA ADLRIGKNYI PERTLLDPDY CPPELYVLPE ETPSPPPEPI AALLSPILWQ LNSPDLFDMY SAGIVLLQMA
401: VPTLRSTAGL KNFNLEIKSV EYDLNRWRER TRTRPDLSIL DLDSGRGWDL VTKLISERGS LRRGRLSAAA ALRHPYFLLG GDQAAAVLSK LSFSK

Arabidopsis Description

STN8Serine/threonine-protein kinase STN8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.