CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005663.1-P	Field mustard	plastid	95.97	95.97
CDY61602	Canola	plastid	88.14	88.14
VIT_08s0058g01450.t01	Wine grape	cytosol	66.53	80.31
AT5G01920.1	Thale cress	plastid	81.57	77.78
KRH64878	Soybean	plastid	71.82	68.21
KRH09551	Soybean	nucleus	71.4	67.0
Solyc10g085680.1.1	Tomato	plastid	68.43	64.99
PGSC0003DMT400021664	Potato	plastid	68.43	64.6
KRH00472	Soybean	plastid	67.8	63.74
OQU78190	Sorghum	plastid	62.5	51.22
TraesCS1B01G311200.1	Wheat	plastid	62.5	49.41
TraesCS1A01G301400.1	Wheat	plastid	62.29	49.41
Os05t0480000-01	Rice	plastid	61.86	49.41
TraesCS1D01G301100.1	Wheat	plastid	61.65	48.74
GSMUA_Achr7P22000_001	Banana	extracellular	64.62	48.03
HORVU1Hr1G069560.1	Barley	plastid	63.14	47.45
CDY33589	Canola	plastid	35.81	30.02
CDX95985	Canola	plastid	35.81	30.02
Zm00001d038485_P001	Maize	plastid	62.71	24.16

Protein Annotations

MapMan:1.1.1.4.1.2	Gene3D:1.10.510.10	MapMan:18.4.3.8	Gene3D:3.30.200.20	GO:A0A078FE08	UniProt:A0A078FE08
EnsemblPlants:CDY11174	ProteinID:CDY11174	ProteinID:CDY11174.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00049186001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR11584	PANTHER:PTHR11584:SF316	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EE8418	SEG:seg	:	:	:	:

Description

BnaA03g00100DBnaA03g00100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FE08]

Coordinates

chrLK032010:-:25722..27509

Molecular Weight (calculated)

52670.7 Da

IEP (calculated)

9.879

GRAVY (calculated)

-0.117

Length

472 amino acids

Sequence
(BLAST)

001: MASSLFSPVT TGSFPWHLKC GFSPHTPLSS HKNSLRCSFS PVDFVGQSLS HLPAFNDTQK WASFASAGLV WFYLTARPGV LVGAIDAYLL APLQLGLDTL
101: IGARRFKRSD FLVTEKLGEG SFGVVYSGLL LPKNSSVDEA RLMNKATLQS LGEEFKERVI LKKVKLGVRG AQEFGEFEEW FNYRLSRAAP DTCAEFLGSF
201: VADKTNSMFT KGGKWLVWRF EGDRDLADYM KDRSFPSNLE SIMFGRVLQG VESVKRRALI IKQIMRQIIT SLRKIHDTGI VHRDVKPANL VVTKKGQIKL
301: IDFGAAADLR IGKNYIPERT LLDPDYCPPE LYVLPEETPS PPPEPIAALL SPILWQLNSP DLFDMYSAGI VLLQMAVPSI RSSAGLKNFN LEIKSVEYDL
401: NRWRDRTRTR PDLSILDLDS GRGWDLVTKL ISERGSLRRG RLSAAAALRH PYFFLGGDQA AAVLSKLSFT SK

Best Arabidopsis Sequence Match ( AT5G01920.2 )
(BLAST)

001: MASLLSPATP TATSAAFHSC STAGFSTPTH ISSQNSSLSL LSRRGCMMRC SFSPQDIPVD SLSHLPPFLD FQNSLATFSD TQKWGFFVSA GIVWFYLTAR
101: PGVLIGAIDA YLLAPLQLGL DTLIGRRLKR SDFLVTEKLG EGSFGVVYAG VLLPKNSTLV DDVRVSKARA KAMDFTGEFK QRVILKKVKV GVRGAEEFGE
201: YEEWFNYRLS RAAPDTCAEF LGSFVADKTN TMFTKGGKWL VWRFEGDRDL ADYMKDRSFP SNLESIMFGR VLQGVESVKR RALIIKQIMR QIITSLRKIH
301: GTGIVHRDVK PANLVVTKKG QIKLIDFGAA ADLRIGKNYI PERTLLDPDY CPPELYVLPE ETPSPPPEPI AALLSPILWQ LNSPDLFDMY SAGIVLLQMA
401: VPTLRSTAGL KNFNLEIKSV EYDLNRWRER TRTRPDLSIL DLDSGRGWDL VTKLISERGS LRRGRLSAAA ALRHPYFLLG GDQAAAVLSK LSFSK

Arabidopsis Description

STN8Serine/threonine-protein kinase STN8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.