Factsheet for VIT_08s0058g01450.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64878	Soybean	plastid	85.17	67.0
KRH09551	Soybean	nucleus	85.93	66.8
Bra005663.1-P	Field mustard	plastid	80.31	66.53
CDY11174	Canola	plastid	80.31	66.53
CDY61602	Canola	plastid	79.28	65.68
Solyc10g085680.1.1	Tomato	plastid	81.33	63.98
AT5G01920.1	Thale cress	plastid	80.56	63.64
PGSC0003DMT400021664	Potato	plastid	81.07	63.4
KRH00472	Soybean	plastid	80.31	62.55
OQU78190	Sorghum	plastid	75.45	51.22
Os05t0480000-01	Rice	plastid	75.7	50.08
TraesCS1B01G311200.1	Wheat	plastid	74.17	48.58
TraesCS1A01G301400.1	Wheat	plastid	73.66	48.4
TraesCS1D01G301100.1	Wheat	plastid	73.15	47.91
GSMUA_Achr7P22000_001	Banana	extracellular	76.21	46.93
HORVU1Hr1G069560.1	Barley	plastid	73.91	46.02
VIT_08s0058g01470.t01	Wine grape	cytosol	7.42	27.62
VIT_01s0011g03010.t01	Wine grape	plastid	39.64	27.05
Zm00001d038485_P001	Maize	plastid	75.96	24.24

Protein Annotations

MapMan:1.1.1.4.1.2	Gene3D:1.10.510.10	EntrezGene:100253288	wikigene:100253288	MapMan:18.4.3.8	Gene3D:3.30.200.20
ProteinID:CBI18022	ProteinID:CBI18022.3	UniProt:D7SQX7	EMBL:FN594967	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100253288	wikigene:LOC100253288	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR11584	PANTHER:PTHR11584:SF316	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGR:TC61135	UniParc:UPI0001BE1390	ArrayExpress:VIT_08s0058g01450	EnsemblPlantsGene:VIT_08s0058g01450	EnsemblPlants:VIT_08s0058g01450.t01
unigene:Vvi.10378	RefSeq:XP_002273138	RefSeq:XP_002273138.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr8:+:10903207..10906815

Molecular Weight (calculated)

43680.0 Da

IEP (calculated)

9.818

GRAVY (calculated)

-0.234

Length

391 amino acids

Sequence
(BLAST)

001: MGAIDSYLLA PLQLGLDSLT GRRNLKRTDF VVGNRLGEGS FGVVYSGVLV PKNVSVEERP QKRGTGQALQ LDGRFKEKVI LKKVKVGVQG AEECGDFEEW
101: FNYRLSRAAP ETCAEFLGSF IADQTNSQFT KGGKWLVWKF EGDRDLADYM KDRNFPLNLE STMFGRVLQG LGSIERNALI IKQIMRQIIT SLKKIHDTGI
201: VHRDVKPSNL VVTKRGQIKL IDFGAATDLR IGKNYVPNRG LLDPDYCPPE LYVLPEETPT PPPEPIAAFL SPILWQLNSP DLFDMYSAGI VLMQMAVPSL
301: RSTAGLKNFN LELKTVGYDL KRWREYTRFR PDLTILDLDS GRGWDLATKL ISERGSLRRG RLSAAAALRH PYFLLGGDQA AAVLSKLSLS K

Best Arabidopsis Sequence Match ( AT5G01920.2 )
(BLAST)

001: MASLLSPATP TATSAAFHSC STAGFSTPTH ISSQNSSLSL LSRRGCMMRC SFSPQDIPVD SLSHLPPFLD FQNSLATFSD TQKWGFFVSA GIVWFYLTAR
101: PGVLIGAIDA YLLAPLQLGL DTLIGRRLKR SDFLVTEKLG EGSFGVVYAG VLLPKNSTLV DDVRVSKARA KAMDFTGEFK QRVILKKVKV GVRGAEEFGE
201: YEEWFNYRLS RAAPDTCAEF LGSFVADKTN TMFTKGGKWL VWRFEGDRDL ADYMKDRSFP SNLESIMFGR VLQGVESVKR RALIIKQIMR QIITSLRKIH
301: GTGIVHRDVK PANLVVTKKG QIKLIDFGAA ADLRIGKNYI PERTLLDPDY CPPELYVLPE ETPSPPPEPI AALLSPILWQ LNSPDLFDMY SAGIVLLQMA
401: VPTLRSTAGL KNFNLEIKSV EYDLNRWRER TRTRPDLSIL DLDSGRGWDL VTKLISERGS LRRGRLSAAA ALRHPYFLLG GDQAAAVLSK LSFSK

Arabidopsis Description

STN8Serine/threonine-protein kinase STN8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.