Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0058g01450.t01 | Wine grape | cytosol | 27.62 | 7.42 |
| VIT_01s0011g03010.t01 | Wine grape | plastid | 21.9 | 4.01 |
Protein Annotations
| ArrayExpress:VIT_08s0058g01470 | EMBL:FN594967 | EnsemblPlants:VIT_08s0058g01470.t01 | EnsemblPlantsGene:VIT_08s0058g01470 | ProteinID:CCB44760 | ProteinID:CCB44760.1 |
| SEG:seg | UniParc:UPI0002109D08 | UniProt:F6GXV9 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr8:+:10913689..10915584
Molecular Weight (calculated)
11793.6 Da
IEP (calculated)
11.057
GRAVY (calculated)
-0.408
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQIQNPEIC RGWDLATKLI SERGSLRSGR LSAALALRHP YFLLGGDQAA AVLSKLSLTL QMLASKSFEW RDKLHQGDLP PVALDKKRQM PSKNEIRLTK
101: KAMRP
101: KAMRP
001: MASLLSPATP TATSAAFHSC STAGFSTPTH ISSQNSSLSL LSRRGCMMRC SFSPQDIPVD SLSHLPPFLD FQNSLATFSD TQKWGFFVSA GIVWFYLTAR
101: PGVLIGAIDA YLLAPLQLGL DTLIGRRLKR SDFLVTEKLG EGSFGVVYAG VLLPKNSTLV DDVRVSKARA KAMDFTGEFK QRVILKKVKV GVRGAEEFGE
201: YEEWFNYRLS RAAPDTCAEF LGSFVADKTN TMFTKGGKWL VWRFEGDRDL ADYMKDRSFP SNLESIMFGR VLQGVESVKR RALIIKQIMR QIITSLRKIH
301: GTGIVHRDVK PANLVVTKKG QIKLIDFGAA ADLRIGKNYI PERTLLDPDY CPPELYVLPE ETPSPPPEPI AALLSPILWQ LNSPDLFDMY SAGIVLLQMA
401: VPTLRSTAGL KNFNLEIKSV EYDLNRWRER TRTRPDLSIL DLDSGRGWDL VTKLISERGS LRRGRLSAAA ALRHPYFLLG GDQAAAVLSK LSFSK
101: PGVLIGAIDA YLLAPLQLGL DTLIGRRLKR SDFLVTEKLG EGSFGVVYAG VLLPKNSTLV DDVRVSKARA KAMDFTGEFK QRVILKKVKV GVRGAEEFGE
201: YEEWFNYRLS RAAPDTCAEF LGSFVADKTN TMFTKGGKWL VWRFEGDRDL ADYMKDRSFP SNLESIMFGR VLQGVESVKR RALIIKQIMR QIITSLRKIH
301: GTGIVHRDVK PANLVVTKKG QIKLIDFGAA ADLRIGKNYI PERTLLDPDY CPPELYVLPE ETPSPPPEPI AALLSPILWQ LNSPDLFDMY SAGIVLLQMA
401: VPTLRSTAGL KNFNLEIKSV EYDLNRWRER TRTRPDLSIL DLDSGRGWDL VTKLISERGS LRRGRLSAAA ALRHPYFLLG GDQAAAVLSK LSFSK
Arabidopsis Description
STN8Serine/threonine-protein kinase STN8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.