Factsheet for Solyc10g085680.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22908117
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021664	Potato	plastid	97.99	97.4
VIT_08s0058g01450.t01	Wine grape	cytosol	63.98	81.33
CDY11174	Canola	plastid	64.99	68.43
CDY61602	Canola	plastid	64.79	68.22
Bra005663.1-P	Field mustard	plastid	64.39	67.8
AT5G01920.1	Thale cress	plastid	65.59	65.86
KRH64878	Soybean	plastid	65.79	65.79
KRH09551	Soybean	nucleus	65.59	64.81
KRH00472	Soybean	plastid	64.79	64.14
OQU78190	Sorghum	plastid	60.56	52.26
Os05t0480000-01	Rice	plastid	60.56	50.93
TraesCS1B01G311200.1	Wheat	plastid	60.36	50.25
TraesCS1A01G301400.1	Wheat	plastid	59.96	50.08
TraesCS1D01G301100.1	Wheat	plastid	59.56	49.58
GSMUA_Achr7P22000_001	Banana	extracellular	62.37	48.82
HORVU1Hr1G069560.1	Barley	plastid	60.56	47.93
Solyc12g021280.1.1	Tomato	plastid	33.8	30.27
Zm00001d038485_P001	Maize	plastid	61.37	24.9

Protein Annotations

MapMan:1.1.1.4.1.2	Gene3D:1.10.510.10	MapMan:18.4.3.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	UniProt:K4D402	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11584	PANTHER:PTHR11584:SF316	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc10g085680.1	EnsemblPlants:Solyc10g085680.1.1	UniParc:UPI000276AA33
SEG:seg	:	:	:	:	:

Description

Serine/threonine-protein kinase STN8, chloroplastic [Source:Projected from Arabidopsis thaliana (AT5G01920) UniProtKB/Swiss-Prot;Acc:Q9LZV4]

Coordinates

chr10:-:64783369..64786656

Molecular Weight (calculated)

55366.8 Da

IEP (calculated)

8.870

GRAVY (calculated)

-0.174

Length

497 amino acids

Sequence
(BLAST)

001: MASLFSPSPT APTTFHQDPN LICYSPLRPI SKSWSCTNHS KRNNTITCSS FVDEISVSLD NSLSQFPVFQ SGYSQFEKFT GELPEEQKLG LLIFAGITWI
101: YLTARPGVLL GAIDAYILAP IQVGLDSLSG KRNFKMKDFL IGERLGEGSF GIVYSGVIVP KNVNLDDIVR KRGSSVKSVI TDSRFKEKVI LKQVKIGVQG
201: AAECGEFEEW FNYRLSRAAP ETCADFLGSF VAEKTNSQYT KGEKWLVWKF EGDRDLGDYM KDRGFPLNIE SVMFGRVLQG LDSIQRNALI IKQIMRQIIT
301: SLKKIHDTGI VHRDVKPSNL VVTKKGQIKL IDFGAATDLR IGKNYVPDKG LLDPDYCPPE LYVMPEETPK PPPEPVAALL SPFLWQLNSP DLFDTYSAGI
401: VLMQMAVPSL RSTAGLKNFN MELNAVGYDL NNWRERTRTR PDLSILDLDS GRGWDLATKL ISERGRRLSA AAALRHPYFL LGGDQAAAVL SKLSFSK

Best Arabidopsis Sequence Match ( AT5G01920.2 )
(BLAST)

001: MASLLSPATP TATSAAFHSC STAGFSTPTH ISSQNSSLSL LSRRGCMMRC SFSPQDIPVD SLSHLPPFLD FQNSLATFSD TQKWGFFVSA GIVWFYLTAR
101: PGVLIGAIDA YLLAPLQLGL DTLIGRRLKR SDFLVTEKLG EGSFGVVYAG VLLPKNSTLV DDVRVSKARA KAMDFTGEFK QRVILKKVKV GVRGAEEFGE
201: YEEWFNYRLS RAAPDTCAEF LGSFVADKTN TMFTKGGKWL VWRFEGDRDL ADYMKDRSFP SNLESIMFGR VLQGVESVKR RALIIKQIMR QIITSLRKIH
301: GTGIVHRDVK PANLVVTKKG QIKLIDFGAA ADLRIGKNYI PERTLLDPDY CPPELYVLPE ETPSPPPEPI AALLSPILWQ LNSPDLFDMY SAGIVLLQMA
401: VPTLRSTAGL KNFNLEIKSV EYDLNRWRER TRTRPDLSIL DLDSGRGWDL VTKLISERGS LRRGRLSAAA ALRHPYFLLG GDQAAAVLSK LSFSK

Arabidopsis Description

STN8Serine/threonine-protein kinase STN8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.