Factsheet for TraesCS6A01G101200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G129300.1	Wheat	endoplasmic reticulum	93.63	94.24
TraesCS6D01G089600.1	Wheat	endoplasmic reticulum	93.14	94.06
HORVU6Hr1G018280.1	Barley	cytosol, endoplasmic reticulum	91.67	88.63
GSMUA_Achr5P20650_001	Banana	cytosol	45.75	83.09
GSMUA_Achr11P...	Banana	endoplasmic reticulum	63.73	69.27
EES17686	Sorghum	endoplasmic reticulum, extracellular	65.2	67.86
TraesCS5A01G534900.1	Wheat	golgi	69.93	66.67
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	51.8	66.6
VIT_11s0037g00300.t01	Wine grape	endoplasmic reticulum	65.52	65.1
KRH72313	Soybean	cytosol	31.54	62.66
KRH54944	Soybean	endoplasmic reticulum	63.4	62.28
Solyc12g009990.1.1	Tomato	endoplasmic reticulum, extracellular	62.91	62.2
PGSC0003DMT400020462	Potato	endoplasmic reticulum, extracellular	62.58	61.87
KRH03040	Soybean	endoplasmic reticulum	63.07	61.66
Bra024060.1-P	Field mustard	cytosol, endoplasmic reticulum	61.6	61.4
CDX72255	Canola	cytosol, endoplasmic reticulum	61.6	61.2
CDY39221	Canola	cytosol, endoplasmic reticulum	61.27	60.98
CDY28196	Canola	endoplasmic reticulum	61.93	60.93
Bra011203.1-P	Field mustard	endoplasmic reticulum	61.93	60.93
AT4G30600.1	Thale cress	endoplasmic reticulum	63.07	60.88
CDX68673	Canola	extracellular	62.42	60.83
Bra014811.1-P	Field mustard	cytosol, endoplasmic reticulum	48.37	56.17
TraesCS3A01G498300.1	Wheat	plastid	15.36	26.18
TraesCS4A01G197700.1	Wheat	plastid	16.83	18.59
TraesCS4A01G197600.1	Wheat	plastid	16.67	18.44
TraesCS1A01G327300.1	Wheat	cytosol	14.05	17.44
TraesCS1A01G327200.1	Wheat	cytosol	13.73	16.9
TraesCS3A01G322800.1	Wheat	mitochondrion	13.24	16.74
TraesCS1A01G075500.1	Wheat	golgi	10.62	16.21

Protein Annotations

Gene3D:1.20.120.140	MapMan:23.3.1.2.1	Gene3D:3.30.450.60	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005047	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005785
GO:GO:0006614	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020	GO:GO:0016787
InterPro:Longin-like_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00448	PFAM:PF02881	PFAM:PF04086	ScanProsite:PS00300
PANTHER:PTHR43134	PANTHER:PTHR43134:SF4	SMART:SM00382	SMART:SM00962	SMART:SM00963	InterPro:SRP/SRP_N
InterPro:SRP54_GTPase_dom	SUPFAM:SSF47364	SUPFAM:SSF52540	SUPFAM:SSF64356	InterPro:Sig_recog_particle_rcpt_asu_N	InterPro:Signal_recog_particl_SRP54_hlx
EnsemblPlantsGene:TraesCS6A01G101200	EnsemblPlants:TraesCS6A01G101200.1	TIGR:cd03115	SEG:seg	:	:

Description

No Description!

Coordinates

chr6A:-:69137463..69139537

Molecular Weight (calculated)

65647.3 Da

IEP (calculated)

9.389

GRAVY (calculated)

-0.313

Length

612 amino acids

Sequence
(BLAST)

001: MLEELLIFTR GGLILWSLAG AAAALKGSPI DALIRSFLLE GRSASAGAGA GFTHGPHALR WTYDNALGLV FVAVYRRVLH LLYVDDLLAA VSAKFARIYN
101: PSRVSYDEFG ERFRQLHLEA EARASRPPPV SAKPAPASSP GALQPHGGVG GGGGGGGGGE KMGDESGKDD SDGEPSRQAK HSSAADGSFN GVEENSHAGN
201: GGVVVEREEE GGPNNGAFNF ENITKFLFPR NDKDKRNKPV HKDKKKPRPG RDKKPVPKDK KPSEKKLDYS NPAVHGGGAG EQTAVNQGKS MMDKDEAVRS
301: TAKDGWFSSM FRSIAGSNAE LKESDLQPAL KSLKDRLMTK NVAEEIAEKL CESVAASLLG KKLGSFTRIS SSVQAAMEEA LVRILTPRRS IDVLRDVHAA
401: KDRGTPYVIV FVGVNGVGKS TNLAKVAYWL LQHDLSVTLA ACDTFRSGAV EQLRTHARRL QIPIFEKGYE RDPAVVAKGA IQEATRNKSD VVLVDTAGRM
501: QDNEPLMRAL SKLINLNNPD LVLFVGEALV GNDAVDQLTK FSQKLTDLST APTARSIDGI LLTKFDTIDD KVGAALSMVY VSGAPVMFVG CGQSYTDLKK
601: LNVKSIVNTL LE

Best Arabidopsis Sequence Match ( AT4G30600.1 )
(BLAST)

001: MLEQLLIFTR GGLILWTCKE IGNALKGSPI DTLIRSCLLE ERSGAVSFNY DAPGAAYTLK WTFHNDLGLV FVAVYQRILH LLYVDDLLSM VKQSFSEVYD
101: PKRMAYDDFD ETFRQLRIEA EARAEELRKT KQVGKPVTSV KKQGQVSKPG LEGGNKRVSS EGGSKKDDGD GGNKAKVSTL TNGHSNGNHQ MEDDSQETND
201: LANGKENTSS NVAVDLSKLQ KLRSKGVRGR GGVRKTDSIG NKSSKVAEPA KKATKKNRVW DDAAPKQSKL DFTDSIDENG NNDHVDIVAA DQGESMMDKE
301: EVFSSDSESE DDDEPGSDEK PAQAKKKGWF SSVFQSITGK ANLERTDLGP ALKALKERLM TKNVAEEIAE KLCESVEASL EGKKLSSFTR ISSTVQAAME
401: DALVRILTPR RSIDILRDVH AAKEQRKPYV VVFVGVNGVG KSTNLAKVAY WLQQHKVSVM MAACDTFRSG AVEQLRTHAR RLQIPIFEKG YEKDPAVVAK
501: EAIQEATRNG SDVVLVDTAG RMQDNEPLMR ALSKLINLNQ PDLVLFVGEA LVGNDAVDQL SKFNQKLSDL STSGNPRLID GILLTKFDTI DDKVGAALSM
601: VYISGSPVMF VGCGQSYTDL KKLNVKAIVK TLLK

Arabidopsis Description

AT4g30600/F17I23_60 [Source:UniProtKB/TrEMBL;Acc:Q9M0A0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.