Factsheet for GSMUA_Achr11P21230_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
mitochondrion 4
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P20650_001	Banana	cytosol	68.28	96.44
GSMUA_Achr11P...	Banana	endoplasmic reticulum	82.35	69.63
KRH72313	Soybean	cytosol	39.71	61.36
VIT_11s0037g00300.t01	Wine grape	endoplasmic reticulum	75.21	58.12
Solyc12g009990.1.1	Tomato	endoplasmic reticulum, extracellular	75.42	58.0
PGSC0003DMT400020462	Potato	endoplasmic reticulum, extracellular	75.21	57.84
EER93028	Sorghum	cytosol, endoplasmic reticulum, mitochondrion, plastid	73.95	56.41
KRH54944	Soybean	endoplasmic reticulum	73.53	56.18
Zm00001d027293_P004	Maize	cytosol, endoplasmic reticulum, mitochondrion, plastid	74.16	55.94
TraesCS5A01G534900.1	Wheat	golgi	75.0	55.61
TraesCS4B01G367200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	75.21	55.5
Bra024060.1-P	Field mustard	cytosol, endoplasmic reticulum	71.01	55.05
CDY39221	Canola	cytosol, endoplasmic reticulum	71.01	54.96
CDX72255	Canola	cytosol, endoplasmic reticulum	71.01	54.87
TraesCS4D01G360300.1	Wheat	cytosol, golgi, mitochondrion, plastid	74.37	54.8
AT4G30600.1	Thale cress	endoplasmic reticulum	72.48	54.42
Bra011203.1-P	Field mustard	endoplasmic reticulum	71.01	54.34
CDY28196	Canola	endoplasmic reticulum	71.01	54.34
KRH03040	Soybean	endoplasmic reticulum	71.43	54.31
CDX68673	Canola	extracellular	71.22	53.98
TraesCS6D01G089600.1	Wheat	endoplasmic reticulum	65.97	51.82
TraesCS6A01G101200.1	Wheat	endoplasmic reticulum	66.6	51.8
TraesCS6B01G129300.1	Wheat	endoplasmic reticulum	65.55	51.32
HORVU6Hr1G018280.1	Barley	cytosol, endoplasmic reticulum	66.81	50.24
EES17686	Sorghum	endoplasmic reticulum, extracellular	61.76	50.0
Bra014811.1-P	Field mustard	cytosol, endoplasmic reticulum	53.36	48.2
GSMUA_Achr11P...	Banana	plastid	20.17	25.13
GSMUA_Achr8P03120_001	Banana	cytosol	18.07	17.3
GSMUA_Achr9P25680_001	Banana	cytosol	14.08	15.37
GSMUA_Achr10P...	Banana	plastid	18.49	15.3

Protein Annotations

Gene3D:1.20.120.140	MapMan:23.3.1.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005047	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005785	GO:GO:0006614
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr11G21230_001
EnsemblPlants:GSMUA_Achr11P21230_001	EnsemblPlants:GSMUA_Achr11T21230_001	UniProt:M0RU53	InterPro:P-loop_NTPase	PFAM:PF00448	PFAM:PF02881
PFAM:PF04086	ScanProsite:PS00300	PANTHER:PTHR43134	PANTHER:PTHR43134:SF4	SMART:SM00382	SMART:SM00962
SMART:SM00963	InterPro:SRP/SRP_N	InterPro:SRP54_GTPase_dom	SUPFAM:SSF47364	SUPFAM:SSF52540	InterPro:Sig_recog_particle_rcpt_asu_N
InterPro:Signal_recog_particl_SRP54_hlx	UniParc:UPI000295FF47	SEG:seg	:	:	:

Description

signal recognition particle receptor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G21230_001]

Coordinates

chr11:-:21936409..21940027

Molecular Weight (calculated)

51427.5 Da

IEP (calculated)

9.794

GRAVY (calculated)

-0.501

Length

476 amino acids

Sequence
(BLAST)

001: MRRFKQAGRA PAAPGKKQVP GAASRGSGKQ RSSGGGGSGK DESDGYPGKG RRSENGSSNG HENEIKPNSR AQNKLRSKGA KKTDTGGGGC KAAKAEPKKI
101: AKKNRVWDDS PSESRLDFTD PVADRGEGPE VVVADQGESM MDKEEIVSSD SEGEEDEEVG NEKPGTKKKG WFSSMLQSIS GNAVLEKSDL RPALKALKDR
201: LMTKNVAEEI AEKLCESVAT SLEGKKLGSF TRVSSTVQTA MEEALLRILT PKRSIDILRD VHAAKEQGRP YVVVFVGVNG VGKSTNLAKV AYWLLQHKIN
301: VMLAACDTFR SGAVEQLRTH ARRLQIPIFE KGYEKDPAIV ANEAIQEAKR NNSDVVLVDT AGRMQDNEPL MRALSKLINL NNPDLVLFVG EALVGNDAVD
401: QLTKFNQKLA DLSMVPNARL IDGILLTKFD TIDDKVGAAL SMVYVSGAPV MFVGCGQSYT DLKKLNIKSI VKTLLK

Best Arabidopsis Sequence Match ( AT4G30600.2 )
(BLAST)

001: MLEQLLIFTR GGLILWTCKE IGNALKGSPI DTLIRSCLLE ERSGAVSFNY DAPGAAYTLK WTFHNDLGLV FVAVYQRILH LLYVDDLLSM VKQSFSEVYD
101: PKRMAYDDFD ETFRQLRIEA EARAEELRKT KQVGKPVTSV KKQGQVSKPG LEGGNKRVSS EGGSKKDDGD GGNKAKVSTL TNGHSNGNHQ MEDDSQETND
201: LANGKENTSS NVAVDLSKLQ KLRSKGVRGR GGVRKTDSIG NKSSKVAEPA KKATKKNRVW DDAAPKQSKL DFTDSIDENG NNDHVDIVAA DQGESMMDKE
301: EVFSSDSESE DDDEPGSDEK PAQAKKKGWF SSVFQSITGK ANLERTDLGP ALKALKERLM TKNVAEEIAE KLCESVEASL EGKKLSSFTR ISSTVQAAME
401: DALVRILTPR RSIDILRDVH AAKEQRKPYV VVFVGVNGVG KSTNLAKVAY WLQQHKVSVM MAACDTFRSG AVEQLRTHAR RLQIPIFEKG YEKDPAVVAK
501: EAIQEATRNG SDVVLVDTAG RMQDNEPLMR ALSKLINLNQ PDLVLFVGEA LVGNDAVDQL SKFNQKLSDL STSGNPRLID GILLTKFDTI DDKVGAALSM
601: VYISGSPVMF VGCGQSYTDL KKLNVKAIVK TLLK

Arabidopsis Description

AT4g30600/F17I23_60 [Source:UniProtKB/TrEMBL;Acc:Q9M0A0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.