Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024060.1-P | Field mustard | cytosol, endoplasmic reticulum | 97.89 | 98.05 |
| CDX72255 | Canola | cytosol, endoplasmic reticulum | 97.89 | 97.73 |
| Bra014811.1-P | Field mustard | cytosol, endoplasmic reticulum | 82.76 | 96.58 |
| CDY28196 | Canola | endoplasmic reticulum | 87.48 | 86.5 |
| GSMUA_Achr5P20650_001 | Banana | cytosol | 47.15 | 86.05 |
| CDX68673 | Canola | extracellular | 87.8 | 85.99 |
| AT4G30600.1 | Thale cress | endoplasmic reticulum | 87.48 | 84.86 |
| VIT_11s0037g00300.t01 | Wine grape | endoplasmic reticulum | 76.75 | 76.62 |
| PGSC0003DMT400020462 | Potato | endoplasmic reticulum, extracellular | 76.42 | 75.93 |
| Solyc12g009990.1.1 | Tomato | endoplasmic reticulum, extracellular | 76.26 | 75.77 |
| KRH54944 | Soybean | endoplasmic reticulum | 76.1 | 75.12 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 68.62 | 74.96 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 54.96 | 71.01 |
| KRH03040 | Soybean | endoplasmic reticulum | 72.2 | 70.93 |
| EER93028 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion, plastid | 69.59 | 68.59 |
| Zm00001d027293_P004 | Maize | cytosol, endoplasmic reticulum, mitochondrion, plastid | 69.59 | 67.83 |
| TraesCS5A01G534900.1 | Wheat | golgi | 70.24 | 67.29 |
| KRH72313 | Soybean | cytosol | 33.66 | 67.21 |
| TraesCS4B01G367200.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plastid | 70.41 | 67.13 |
| TraesCS4D01G360300.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 70.24 | 66.87 |
| TraesCS6D01G089600.1 | Wheat | endoplasmic reticulum | 60.98 | 61.88 |
| TraesCS6A01G101200.1 | Wheat | endoplasmic reticulum | 60.98 | 61.27 |
| TraesCS6B01G129300.1 | Wheat | endoplasmic reticulum | 60.49 | 61.18 |
| EES17686 | Sorghum | endoplasmic reticulum, extracellular | 58.37 | 61.05 |
| HORVU6Hr1G018280.1 | Barley | cytosol, endoplasmic reticulum | 60.65 | 58.93 |
| CDY18901 | Canola | plastid | 15.94 | 27.15 |
| CDX74765 | Canola | plastid | 16.1 | 26.9 |
| CDY27360 | Canola | plastid | 15.94 | 26.7 |
| CDY37064 | Canola | plastid | 15.94 | 26.63 |
| CDY10656 | Canola | cytosol | 6.02 | 18.88 |
| CDY36546 | Canola | cytosol | 13.66 | 17.54 |
| CDY39632 | Canola | cytosol | 13.66 | 17.5 |
| CDX93702 | Canola | cytosol | 13.98 | 17.37 |
| CDY40616 | Canola | cytosol | 13.98 | 17.37 |
| CDX77276 | Canola | cytosol | 13.98 | 17.34 |
| CDY16472 | Canola | cytosol | 10.89 | 17.09 |
| CDY46694 | Canola | cytosol | 8.46 | 16.77 |
| CDY04905 | Canola | plastid | 15.28 | 16.67 |
| CDX70273 | Canola | plastid | 15.28 | 16.61 |
| CDY41424 | Canola | plastid | 15.12 | 16.46 |
| CDY17067 | Canola | cytosol, nucleus | 8.62 | 16.41 |
| CDY14166 | Canola | plastid | 14.96 | 16.31 |
| CDY14165 | Canola | plastid | 5.85 | 16.0 |
Protein Annotations
| Gene3D:1.20.120.140 | MapMan:23.3.1.2.1 | Gene3D:3.30.450.60 | Gene3D:3.40.50.300 | GO:A0A078HNQ8 | UniProt:A0A078HNQ8 |
| InterPro:AAA+_ATPase | EnsemblPlants:CDY39221 | ProteinID:CDY39221 | ProteinID:CDY39221.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005047 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005785 | GO:GO:0006614 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0016787 |
| EnsemblPlantsGene:GSBRNA2T00067441001 | InterPro:Longin-like_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00448 | PFAM:PF02881 | PFAM:PF04086 |
| ScanProsite:PS00300 | PANTHER:PTHR43134 | PANTHER:PTHR43134:SF4 | SMART:SM00382 | SMART:SM00962 | SMART:SM00963 |
| InterPro:SRP/SRP_N | InterPro:SRP54_GTPase_dom | SUPFAM:SSF47364 | SUPFAM:SSF52540 | SUPFAM:SSF64356 | InterPro:Sig_recog_particle_rcpt_asu_N |
| InterPro:Signal_recog_particl_SRP54_hlx | UniParc:UPI0004EF318C | SEG:seg | : | : | : |
Description
BnaA03g50330DBnaA03g50330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNQ8]
Coordinates
chrLK032443:-:218369..221471
Molecular Weight (calculated)
68067.2 Da
IEP (calculated)
6.558
GRAVY (calculated)
-0.469
Length
615 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEQLLIFTR GGLILWTCKE IGNALKGSPI DTLIRSCLLE ERSGEVSFNY GAYTLKWTFH NELGLVFVAV YQKILQLLYV DDLLSIVKQS FSEMYDPKRM
101: RYDDFEETFR QLSVEAEARA EEMKRTKQVV KPLNGVKKQG QVSKEETKKS NGEKKDDEGK VSSVSNGNHK MEDDVANGKE NSADNNINSV GVDVSKLAKL
201: RSKGVRGRGG LRKADSLGSN KGSSKVEPPK KATKKNRVWD DAAAAPKQEE KLDFTDENGD NGHVDVVAAA DQGESMMDKE EVFSSDSESE DDDDDEPRSD
301: EKPEAKKKGW FSSVFQSITG KANLERTDLE PALKALKERL MTKNVAEEIA EKLCESVEAS LEGKKLASFT RISSTVQGAM EDALIRILTP RRSIDIMRDV
401: HAAKEQRRPY VVVFVGVNGV GKSTNLAKVA YWLQQHKVSV MMAACDTFRS GAVEQLRTHA RRLQIPIFEK GYEKDPAVVA KEAIQEATRN GSDVVLVDTA
501: GRMQDNEPLM RALSKLINLN KPDLVLFVGE ALVGNDAVDQ LSKFNQKLSD LSTSGNTRLI DGILLTKFDT IDDKVGAALS MVYISGAPVM FVGCGQSYTD
601: LKKLNVKAIV KTLLK
101: RYDDFEETFR QLSVEAEARA EEMKRTKQVV KPLNGVKKQG QVSKEETKKS NGEKKDDEGK VSSVSNGNHK MEDDVANGKE NSADNNINSV GVDVSKLAKL
201: RSKGVRGRGG LRKADSLGSN KGSSKVEPPK KATKKNRVWD DAAAAPKQEE KLDFTDENGD NGHVDVVAAA DQGESMMDKE EVFSSDSESE DDDDDEPRSD
301: EKPEAKKKGW FSSVFQSITG KANLERTDLE PALKALKERL MTKNVAEEIA EKLCESVEAS LEGKKLASFT RISSTVQGAM EDALIRILTP RRSIDIMRDV
401: HAAKEQRRPY VVVFVGVNGV GKSTNLAKVA YWLQQHKVSV MMAACDTFRS GAVEQLRTHA RRLQIPIFEK GYEKDPAVVA KEAIQEATRN GSDVVLVDTA
501: GRMQDNEPLM RALSKLINLN KPDLVLFVGE ALVGNDAVDQ LSKFNQKLSD LSTSGNTRLI DGILLTKFDT IDDKVGAALS MVYISGAPVM FVGCGQSYTD
601: LKKLNVKAIV KTLLK
001: MLEQLLIFTR GGLILWTCKE IGNALKGSPI DTLIRSCLLE ERSGAVSFNY DAPGAAYTLK WTFHNDLGLV FVAVYQRILH LLYVDDLLSM VKQSFSEVYD
101: PKRMAYDDFD ETFRQLRIEA EARAEELRKT KQVGKPVTSV KKQGQVSKPG LEGGNKRVSS EGGSKKDDGD GGNKAKVSTL TNGHSNGNHQ MEDDSQETND
201: LANGKENTSS NVAVDLSKLQ KLRSKGVRGR GGVRKTDSIG NKSSKVAEPA KKATKKNRVW DDAAPKQSKL DFTDSIDENG NNDHVDIVAA DQGESMMDKE
301: EVFSSDSESE DDDEPGSDEK PAQAKKKGWF SSVFQSITGK ANLERTDLGP ALKALKERLM TKNVAEEIAE KLCESVEASL EGKKLSSFTR ISSTVQAAME
401: DALVRILTPR RSIDILRDVH AAKEQRKPYV VVFVGVNGVG KSTNLAKVAY WLQQHKVSVM MAACDTFRSG AVEQLRTHAR RLQIPIFEKG YEKDPAVVAK
501: EAIQEATRNG SDVVLVDTAG RMQDNEPLMR ALSKLINLNQ PDLVLFVGEA LVGNDAVDQL SKFNQKLSDL STSGNPRLID GILLTKFDTI DDKVGAALSM
601: VYISGSPVMF VGCGQSYTDL KKLNVKAIVK TLLK
101: PKRMAYDDFD ETFRQLRIEA EARAEELRKT KQVGKPVTSV KKQGQVSKPG LEGGNKRVSS EGGSKKDDGD GGNKAKVSTL TNGHSNGNHQ MEDDSQETND
201: LANGKENTSS NVAVDLSKLQ KLRSKGVRGR GGVRKTDSIG NKSSKVAEPA KKATKKNRVW DDAAPKQSKL DFTDSIDENG NNDHVDIVAA DQGESMMDKE
301: EVFSSDSESE DDDEPGSDEK PAQAKKKGWF SSVFQSITGK ANLERTDLGP ALKALKERLM TKNVAEEIAE KLCESVEASL EGKKLSSFTR ISSTVQAAME
401: DALVRILTPR RSIDILRDVH AAKEQRKPYV VVFVGVNGVG KSTNLAKVAY WLQQHKVSVM MAACDTFRSG AVEQLRTHAR RLQIPIFEKG YEKDPAVVAK
501: EAIQEATRNG SDVVLVDTAG RMQDNEPLMR ALSKLINLNQ PDLVLFVGEA LVGNDAVDQL SKFNQKLSDL STSGNPRLID GILLTKFDTI DDKVGAALSM
601: VYISGSPVMF VGCGQSYTDL KKLNVKAIVK TLLK
Arabidopsis Description
AT4g30600/F17I23_60 [Source:UniProtKB/TrEMBL;Acc:Q9M0A0]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.