Factsheet for GSMUA_Achr11P04060_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
cytosol 1
extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 3
vacuole 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P20650_001	Banana	cytosol	56.66	94.66
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	69.63	82.35
VIT_11s0037g00300.t01	Wine grape	endoplasmic reticulum	81.53	74.51
Solyc12g009990.1.1	Tomato	endoplasmic reticulum, extracellular	79.4	72.21
PGSC0003DMT400020462	Potato	endoplasmic reticulum, extracellular	78.86	71.73
EER93028	Sorghum	cytosol, endoplasmic reticulum, mitochondrion, plastid	79.4	71.63
KRH54944	Soybean	endoplasmic reticulum	79.04	71.43
TraesCS5A01G534900.1	Wheat	golgi	80.11	70.25
TraesCS4B01G367200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	80.28	70.08
Zm00001d027293_P004	Maize	cytosol, endoplasmic reticulum, mitochondrion, plastid	78.51	70.05
TraesCS4D01G360300.1	Wheat	cytosol, golgi, mitochondrion, plastid	79.75	69.5
KRH03040	Soybean	endoplasmic reticulum	76.91	69.17
Bra024060.1-P	Field mustard	cytosol, endoplasmic reticulum	75.13	68.89
CDX72255	Canola	cytosol, endoplasmic reticulum	75.31	68.83
AT4G30600.1	Thale cress	endoplasmic reticulum	77.44	68.77
CDY39221	Canola	cytosol, endoplasmic reticulum	74.96	68.62
Bra011203.1-P	Field mustard	endoplasmic reticulum	75.13	68.01
CDY28196	Canola	endoplasmic reticulum	75.13	68.01
CDX68673	Canola	extracellular	75.84	67.99
KRH72313	Soybean	cytosol	36.06	65.91
TraesCS6D01G089600.1	Wheat	endoplasmic reticulum	69.09	64.19
Bra014811.1-P	Field mustard	cytosol, endoplasmic reticulum	59.86	63.95
TraesCS6A01G101200.1	Wheat	endoplasmic reticulum	69.27	63.73
EES17686	Sorghum	endoplasmic reticulum, extracellular	66.25	63.44
TraesCS6B01G129300.1	Wheat	endoplasmic reticulum	68.21	63.16
HORVU6Hr1G018280.1	Barley	cytosol, endoplasmic reticulum	69.45	61.77
GSMUA_Achr11P...	Banana	plastid	17.58	25.92
GSMUA_Achr10P...	Banana	plastid	17.76	17.39
GSMUA_Achr8P03120_001	Banana	cytosol	15.1	17.1
GSMUA_Achr9P25680_001	Banana	cytosol	12.08	15.6

Protein Annotations

Gene3D:1.20.120.140	MapMan:23.3.1.2.1	Gene3D:3.30.450.60	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005047	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005785	GO:GO:0006614	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020
GO:GO:0016192	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr11G04060_001	EnsemblPlants:GSMUA_Achr11P04060_001	EnsemblPlants:GSMUA_Achr11T04060_001	InterPro:Longin-like_dom_sf
UniProt:M0RP86	InterPro:P-loop_NTPase	PFAM:PF00448	PFAM:PF02881	PFAM:PF04086	ScanProsite:PS00300
PANTHER:PTHR43134	PANTHER:PTHR43134:SF4	SMART:SM00382	SMART:SM00962	SMART:SM00963	InterPro:SRP/SRP_N
InterPro:SRP54_GTPase_dom	SUPFAM:SSF47364	SUPFAM:SSF52540	SUPFAM:SSF64356	InterPro:Sig_recog_particle_rcpt_asu_N	InterPro:Signal_recog_particl_SRP54_hlx
UniParc:UPI000295D99E	SEG:seg	:	:	:	:

Description

Putative Signal recognition particle receptor subunit alpha homolog [Source:GMGC_GENE;Acc:GSMUA_Achr11G04060_001]

Coordinates

chr11:+:2970591..2974413

Molecular Weight (calculated)

62142.3 Da

IEP (calculated)

6.237

GRAVY (calculated)

-0.302

Length

563 amino acids

Sequence
(BLAST)

001: MLDQLLIFTR GGLILWELGS SLKGSPIDAL IRSCLLEERS ADAAFHYDAP GAAGGAAYTL KWVFDNDLGL VFVAVYQRIF HLLYVDDLLA AVRREFSRIH
101: DPSRTSYDDF NETFRQLQKE AEARAEEMRK SKQAARSDGD SGKGRWLANV GAFDVNKLQK LRSKGGKKTD AGGVGSKATK AEPKKNVKKN RVWDDSPSES
201: RLDFTNPVDE RGEEPLEVVE ADRGESMMDK EEIVSSESES EEDEEVENEK PCTKKKGWFS SMFQSIAGNA VLEKSDLKPA LKALKDRLMT KNVAEEIAEK
301: LCESVAASLE GKKLGSFTRV SSTVQTAMEE ALLRILTPKR SIDILRDVHV AKEHGRPYVV VFVGVNGVGK STNLAKVAYW LLQHEVSVML AACDTFRSGA
401: VEQLRTHARR LQIPIFEKGY EKDPAIVAKE AIQEAKSNNS DVVLVDTAGR MQDNEPLMRA LSKLINLNNP DLVLFVGEAL VGNDAVDQLT KFNQKLADLS
501: TISNARLIDG ILLTKFDTID DKVGAALSMV YVSGAPVMFV GCGQSYTDLK KLNVKSIVKT LLK

Best Arabidopsis Sequence Match ( AT4G30600.2 )
(BLAST)

001: MLEQLLIFTR GGLILWTCKE IGNALKGSPI DTLIRSCLLE ERSGAVSFNY DAPGAAYTLK WTFHNDLGLV FVAVYQRILH LLYVDDLLSM VKQSFSEVYD
101: PKRMAYDDFD ETFRQLRIEA EARAEELRKT KQVGKPVTSV KKQGQVSKPG LEGGNKRVSS EGGSKKDDGD GGNKAKVSTL TNGHSNGNHQ MEDDSQETND
201: LANGKENTSS NVAVDLSKLQ KLRSKGVRGR GGVRKTDSIG NKSSKVAEPA KKATKKNRVW DDAAPKQSKL DFTDSIDENG NNDHVDIVAA DQGESMMDKE
301: EVFSSDSESE DDDEPGSDEK PAQAKKKGWF SSVFQSITGK ANLERTDLGP ALKALKERLM TKNVAEEIAE KLCESVEASL EGKKLSSFTR ISSTVQAAME
401: DALVRILTPR RSIDILRDVH AAKEQRKPYV VVFVGVNGVG KSTNLAKVAY WLQQHKVSVM MAACDTFRSG AVEQLRTHAR RLQIPIFEKG YEKDPAVVAK
501: EAIQEATRNG SDVVLVDTAG RMQDNEPLMR ALSKLINLNQ PDLVLFVGEA LVGNDAVDQL SKFNQKLSDL STSGNPRLID GILLTKFDTI DDKVGAALSM
601: VYISGSPVMF VGCGQSYTDL KKLNVKAIVK TLLK

Arabidopsis Description

AT4g30600/F17I23_60 [Source:UniProtKB/TrEMBL;Acc:Q9M0A0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.