Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g009550.2.1 | Tomato | nucleus | 74.29 | 10.2 |
| PGSC0003DMT400082463 | Potato | nucleus | 74.29 | 10.2 |
| CDY51435 | Canola | nucleus | 71.43 | 9.96 |
| EES15493 | Sorghum | nucleus | 71.43 | 9.77 |
| AT3G55005.1 | Thale cress | nucleus | 71.43 | 9.73 |
| EES07835 | Sorghum | nucleus | 71.43 | 9.73 |
| CDX67619 | Canola | nucleus | 71.43 | 9.73 |
| CDY07508 | Canola | nucleus | 71.43 | 9.69 |
| Os11t0102600-01 | Rice | plasma membrane | 71.43 | 9.65 |
| Os12t0102200-01 | Rice | nucleus | 71.43 | 9.65 |
| CDX73418 | Canola | nucleus | 71.43 | 9.62 |
| AT3G55000.1 | Thale cress | nucleus | 71.43 | 9.62 |
| VIT_13s0067g03320.t01 | Wine grape | nucleus | 71.43 | 9.43 |
| TraesCS5D01G162200.1 | Wheat | nucleus | 68.57 | 9.3 |
| TraesCS5B01G155000.1 | Wheat | nucleus | 68.57 | 9.3 |
| TraesCS5A01G156800.1 | Wheat | nucleus | 68.57 | 9.3 |
| Zm00001d005102_P001 | Maize | mitochondrion | 68.57 | 9.3 |
| Solyc04g049710.2.1 | Tomato | nucleus | 68.57 | 9.09 |
| KRG93030 | Soybean | nucleus | 68.57 | 9.09 |
| KRH36276 | Soybean | nucleus | 68.57 | 9.06 |
| GSMUA_Achr10P... | Banana | nucleus | 68.57 | 8.92 |
| GSMUA_Achr11P... | Banana | nucleus | 65.71 | 8.61 |
| HORVU5Hr1G049020.1 | Barley | plastid | 68.57 | 7.89 |
Protein Annotations
| EnsemblPlants:CDY51434 | EnsemblPlantsGene:GSBRNA2T00003465001 | ProteinID:CDY51434 | ProteinID:CDY51434.1 | UniParc:UPI0004EE542F | UniProt:A0A078IPV2 |
| MapMan:13.4.1.2.1 | : | : | : | : | : |
Description
BnaA09g54790DBnaA09g54790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPV2]
Coordinates
chrLK032995:+:2428..2814
Molecular Weight (calculated)
3992.7 Da
IEP (calculated)
4.329
GRAVY (calculated)
-0.483
Length
35 amino acids
Sequence
(BLAST)
(BLAST)
1: MDDYTREGVL AKIRGEPRAN VFVAIEDDDK VVEKL
001: MDDYTREMMD LKTLVTRTLE KKGVLAKIRA ELRASVFEAI EEEDRVIENN EGPPPALLGS CNDRARKLHA SPSGRLLSAL ICEYLDWAQL NHTLIVYQPE
101: SNLPKDSWKS ELRDFNSNNG FELNRNGDSG PLLLDVLEGF LKFESMTQGM GSSSRRDSET ESSSSLESRN PPRRSSASDS LPPQRRPVSA SQASDRRAGL
201: STSGYRKDEF NWRQGNQDTH EEVTRASAAL ENLQLDRKTR NLTSSWRNVR DGTNEEEGRD
101: SNLPKDSWKS ELRDFNSNNG FELNRNGDSG PLLLDVLEGF LKFESMTQGM GSSSRRDSET ESSSSLESRN PPRRSSASDS LPPQRRPVSA SQASDRRAGL
201: STSGYRKDEF NWRQGNQDTH EEVTRASAAL ENLQLDRKTR NLTSSWRNVR DGTNEEEGRD
Arabidopsis Description
TON1AProtein TONNEAU 1a [Source:UniProtKB/Swiss-Prot;Acc:Q9FQ25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.