Factsheet for AT3G55000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003203.1-P	Field mustard	nucleus	85.0	85.99
CDX67619	Canola	nucleus	85.0	85.99
AT3G55005.1	Thale cress	nucleus	85.0	85.99
CDY07508	Canola	nucleus	84.23	84.88
CDY51434	Canola	cytosol	9.62	71.43
PGSC0003DMT400082463	Potato	nucleus	69.62	70.98
Solyc04g009550.2.1	Tomato	nucleus	68.46	69.8
Solyc04g049710.2.1	Tomato	nucleus	70.38	69.32
VIT_13s0067g03320.t01	Wine grape	nucleus	70.38	69.06
KRH36276	Soybean	nucleus	68.46	67.17
KRG93030	Soybean	nucleus	67.69	66.67
EES15493	Sorghum	nucleus	64.23	65.23
EES07835	Sorghum	nucleus	63.46	64.2
Zm00001d005102_P001	Maize	mitochondrion	63.08	63.57
Os11t0102600-01	Rice	plasma membrane	63.08	63.32
Os12t0102200-01	Rice	nucleus	63.08	63.32
TraesCS5A01G156800.1	Wheat	nucleus	62.69	63.18
TraesCS5B01G155000.1	Wheat	nucleus	62.69	63.18
TraesCS5D01G162200.1	Wheat	nucleus	62.69	63.18
GSMUA_Achr10P...	Banana	nucleus	64.62	62.45
GSMUA_Achr11P...	Banana	nucleus	63.85	62.17
HORVU5Hr1G049020.1	Barley	plastid	61.92	52.96

Protein Annotations

Gene3D:1.20.960.40	MapMan:13.4.1.2.1	EntrezGene:824665	ProteinID:AAG35779.1	ProteinID:AEE79325.1	EMBL:AK117295
EMBL:AL049655	ArrayExpress:AT3G55000	EnsemblPlantsGene:AT3G55000	RefSeq:AT3G55000	TAIR:AT3G55000	RefSeq:AT3G55000-TAIR-G
EnsemblPlants:AT3G55000.1	TAIR:AT3G55000.1	EMBL:BT024487	ncoils:Coil	GO:GO:0000226	GO:GO:0000913
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005856	GO:GO:0005886	GO:GO:0005938	GO:GO:0007049	GO:GO:0008150
GO:GO:0009574	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030863	GO:GO:0030865
GO:GO:0030981	InterPro:IPR006594	InterPro:LisH	RefSeq:NP_567012.1	PFAM:PF16045	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001017	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	PFscan:PS50896	PANTHER:PTHR15431	UniProt:Q9FQ25	Symbol:TON1A
UniParc:UPI00000AC48F	SEG:seg	:	:	:	:

Description

TON1AProtein TONNEAU 1a [Source:UniProtKB/Swiss-Prot;Acc:Q9FQ25]

Coordinates

chr3:+:20381460..20383878

Molecular Weight (calculated)

29335.9 Da

IEP (calculated)

5.136

GRAVY (calculated)

-0.947

Length

260 amino acids

Sequence
(BLAST)

001: MDDYTREMMD LKTLVTRTLE KKGVLAKIRA ELRASVFEAI EEEDRVIENN EGPPPALLGS CNDRARKLHA SPSGRLLSAL ICEYLDWAQL NHTLIVYQPE
101: SNLPKDSWKS ELRDFNSNNG FELNRNGDSG PLLLDVLEGF LKFESMTQGM GSSSRRDSET ESSSSLESRN PPRRSSASDS LPPQRRPVSA SQASDRRAGL
201: STSGYRKDEF NWRQGNQDTH EEVTRASAAL ENLQLDRKTR NLTSSWRNVR DGTNEEEGRD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.