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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 1
  • peroxisome 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G51910.1 TraesCS3A01G123700.1 AT2G03500.1 21798944
AT5G51910.1 TraesCS3B01G144100.1 AT2G03500.1 21798944
AT5G51910.1 TraesCS3D01G125300.1 AT2G03500.1 21798944
AT5G51910.1 TraesCS1A01G044200.1 AT2G30050.1 21798944
AT5G51910.1 TraesCS1B01G057100.1 AT2G30050.1 21798944
AT5G51910.1 TraesCS1D01G044700.1 AT2G30050.1 21798944
AT5G51910.1 TraesCS3B01G162400.1 AT2G30050.1 21798944
AT5G51910.1 TraesCS3D01G145000.1 AT2G30050.1 21798944
AT5G51910.1 TraesCS5A01G485600.1 AT2G30050.1 21798944
AT5G51910.1 TraesCS5B01G499200.1 AT2G30050.1 21798944
AT5G51910.1 TraesCS2A01G168800.1 AT3G16980.1 21798944
AT5G51910.1 TraesCS2B01G195100.1 AT3G16980.1 21798944
AT5G51910.1 TraesCS2D01G176400.1 AT3G16980.1 21798944
AT5G51910.1 TraesCS7A01G512700.1 AT3G20420.1 21798944
AT5G51910.1 TraesCS7A01G513400.1 AT3G20420.1 21798944
AT5G51910.1 TraesCS7A01G513500.1 AT3G20420.1 21798944
AT5G51910.1 TraesCS7B01G428200.1 AT3G20420.1 21798944
AT5G51910.1 TraesCS7B01G430900.2 AT3G20420.1 21798944
AT5G51910.1 TraesCS7D01G398600.2 AT3G20420.1 21798944
AT5G51910.1 TraesCS7D01G502800.1 AT3G20420.1 21798944
AT5G51910.1 TraesCS7D01G504300.3 AT3G20420.1 21798944
AT5G51910.1 TraesCSU01G086900.1 AT3G20420.1 21798944
AT5G51910.1 TraesCS1A01G350500.1 AT3G29160.1 21798944
AT5G51910.1 TraesCS1B01G364800.1 AT3G29160.1 21798944
AT5G51910.1 TraesCS1D01G353300.1 AT3G29160.1 21798944
AT5G51910.1 TraesCS3A01G282800.1 AT3G29160.1 21798944
AT5G51910.1 TraesCS3B01G316500.1 AT3G29160.1 21798944
AT5G51910.1 TraesCS3D01G282800.1 AT3G29160.1 21798944
AT5G51910.1 TraesCS2A01G081300.1 AT3G47640.1 21798944
AT5G51910.1 TraesCS2A01G157800.1 AT3G47640.1 21798944
AT5G51910.1 TraesCS2B01G095900.1 AT3G47640.1 21798944
AT5G51910.1 TraesCS2B01G183300.1 AT3G47640.1 21798944
AT5G51910.1 TraesCS2D01G079100.1 AT3G47640.1 21798944
AT5G51910.1 TraesCS2D01G163900.2 AT3G47640.1 21798944
AT5G51910.1 TraesCS4A01G163300.1 AT3G47640.1 21798944
AT5G51910.1 TraesCS4B01G125400.1 AT3G47640.1 21798944
AT5G51910.1 TraesCS1A01G252400.1 AT4G04800.1 21798944
AT5G51910.1 TraesCS1B01G265600.1 AT4G04800.1 21798944
AT5G51910.1 TraesCS1D01G252100.1 AT4G04800.1 21798944
AT5G51910.1 TraesCS1A01G130000.1 AT4G11175.1 21798944
AT5G51910.1 TraesCS3A01G431900.1 AT4G11175.1 21798944
AT5G51910.1 TraesCS3A01G454200.1 AT4G11175.1 21798944
AT5G51910.1 TraesCS5B01G312400.1 AT4G11175.1 21798944
AT5G51910.1 TraesCS4A01G494700.1 AT4G16760.1 21798944
AT5G51910.1 TraesCS7A01G003900.1 AT4G16760.1 21798944
AT5G51910.1 TraesCS7D01G004400.1 AT4G16760.1 21798944
AT5G51910.1 TraesCS2B01G597300.1 AT5G07840.1 21798944
AT5G51910.1 TraesCS6A01G004600.1 AT5G07840.1 21798944
AT5G51910.1 TraesCS6B01G009600.1 AT5G07840.1 21798944
AT5G51910.1 TraesCS6D01G006600.1 AT5G07840.1 21798944
AT5G51910.1 TraesCS6A01G412800.1 AT5G08330.1 21798944
AT5G51910.1 TraesCS6B01G462100.1 AT5G08330.1 21798944
AT5G51910.1 TraesCS6D01G397000.1 AT5G08330.1 21798944
AT5G51910.1 TraesCS4A01G355900.1 AT5G51910.1 21798944
AT5G51910.1 TraesCS5A01G309300.1 AT5G51910.1 21798944
AT5G51910.1 TraesCS5B01G310000.1 AT5G51910.1 21798944
AT5G51910.1 TraesCS5B01G516200.1 AT5G51910.1 21798944
AT5G51910.1 TraesCS5D01G316300.1 AT5G51910.1 21798944
AT5G51910.1 TraesCS5D01G516300.1 AT5G51910.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G316300.1 Wheat nucleus 91.12 92.22
TraesCS5B01G310000.1 Wheat cytosol, nucleus, peroxisome 91.72 91.45
EER99208 Sorghum nucleus 56.51 58.59
Zm00001d006165_P001 Maize nucleus 57.1 58.48
HORVU5Hr1G080210.1 Barley cytosol 39.94 49.45
Os09t0521300-00 Rice nucleus 54.14 48.03
VIT_16s0022g02480.t01 Wine grape nucleus 15.38 30.77
TraesCS2A01G376000.1 Wheat plastid 17.75 29.27
TraesCS6A01G233800.1 Wheat plastid 17.46 29.06
CDY27099 Canola nucleus 22.78 27.6
GSMUA_Achr3P12320_001 Banana cytosol 15.98 26.73
CDX91612 Canola nucleus 22.49 26.39
Bra022568.1-P Field mustard cytosol 23.08 26.26
AT5G51910.1 Thale cress nucleus 22.19 25.6
TraesCS4A01G355900.1 Wheat nucleus 22.19 25.34
KRH35393 Soybean nucleus 22.19 24.12
KRG91429 Soybean nucleus 23.08 23.93
TraesCS6A01G412800.1 Wheat mitochondrion 13.61 23.23
CDX95656 Canola nucleus 20.12 23.21
TraesCS6A01G306500.1 Wheat nucleus 27.22 22.77
CDY53888 Canola nucleus 20.41 22.19
Bra000395.1-P Field mustard nucleus 20.41 22.19
VIT_15s0048g01150.t01 Wine grape nucleus 21.89 21.83
PGSC0003DMT400088049 Potato cytosol 17.16 21.48
PGSC0003DMT400094424 Potato cytosol 15.38 21.22
TraesCS4A01G222700.1 Wheat nucleus, plastid 23.96 21.04
Bra004929.1-P Field mustard nucleus 20.12 20.99
CDX74756 Canola nucleus 20.12 20.92
Solyc03g006800.1.1 Tomato nucleus 20.12 20.86
CDY18910 Canola nucleus 19.82 20.62
KRH48289 Soybean nucleus 20.41 20.6
KRH03994 Soybean nucleus 20.71 20.59
KRH65181 Soybean nucleus 20.41 20.54
KRH57263 Soybean nucleus 21.01 20.52
TraesCS3A01G436100.1 Wheat nucleus, plastid 20.41 20.23
PGSC0003DMT400062327 Potato nucleus 21.3 19.67
AT2G45680.1 Thale cress cytosol 20.41 19.38
TraesCS5A01G121800.1 Wheat nucleus 23.08 18.62
Solyc08g080150.1.1 Tomato nucleus 18.93 17.3
VIT_02s0025g04590.t01 Wine grape nucleus 21.01 17.27
PGSC0003DMT400058534 Potato nucleus 18.64 16.84
Protein Annotations
EnsemblPlants:TraesCS5A01G309300.1EnsemblPlantsGene:TraesCS5A01G309300InterPro:IPR017887InterPro:TF_TCP_subgrInterPro:Transcription_factor_TCPPANTHER:PTHR31072
PANTHER:PTHR31072:SF19PFAM:PF03634PFscan:PS51369SEG:segMapMan:15.5.19:
Description
No Description!
Coordinates
chr5A:-:521743815..521744831
Molecular Weight (calculated)
34497.3 Da
IEP (calculated)
4.831
GRAVY (calculated)
-0.340
Length
338 amino acids
Sequence
(BLAST)
001: MESQLQGNGE QATDARYHDA PSAAPVPASN APLAIAVVPA AAHGPIVPKP EQAPGEFLGG LAVALPPRNR DRHTKVEGRG RRIRMAAPCA ARVAQLTREL
101: GHKTDGDTIR WLLQQSEPAI VAATGTGTVP AIATTVDGVL RIPTESASAA GADGAGPASK RRKLQPTRAA GGAGPLVGAP PAAYYPVAAD PLLQGNGAIS
201: VSSGLAPVSA AAAPAGGGIP FFTIRVPASG DGKQMVSPAG MWMLQQPPAA GGAPNQPMQY WPFPPNPAEF NNFPGAQAIN VANYQQQPCY SPMQFVAAGG
301: EPQDQQQADG RSEGADGQTQ GLEDDYDGEA LTDSSSEE
Best Arabidopsis Sequence Match ( AT2G45680.1 )
(BLAST)
001: MATIQKLEEV AGKDQTLRAV DLTIINGVRN VETSRPFQVN PTVSLEPKAE PVMPSFSMSL APPSSTGPPL KRASTKDRHT KVEGRGRRIR MPATCAARIF
101: QLTRELGHKS DGETIRWLLE NAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNADSDMGE NLMKKKRKRP SNSEYIDISD AVSASSGLAP IATTTTIQPP
201: QALASSTVAQ QLLPQGMYPM WAIPSNAMIP TVGAFFLIPQ IAGPSNQPQL LAFPAAAASP SSYVAAVQQA STMARPPPLQ VVPSSGFVSV SDVSGSNLSR
301: ATSVMAPSSS SGVTTGSSSS IATTTTHTLR DFSLEIYEKQ ELHQFMSTTT ARSSNH
Arabidopsis Description
TCP9Transcription factor TCP9 [Source:UniProtKB/Swiss-Prot;Acc:O64647]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.