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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 1
PPI
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G512700.1 Wheat mitochondrion 91.51 92.01
TraesCS7B01G430900.2 Wheat mitochondrion 84.66 82.62
Os05t0271300-00 Rice cytosol, nucleus, plastid 66.03 76.03
Zm00001d009879_P002 Maize plastid 75.62 73.4
KXG21693 Sorghum plastid 74.25 61.31
GSMUA_Achr7P11130_001 Banana cytosol, nucleus, plastid 53.7 57.48
Solyc10g006210.1.1 Tomato cytosol 14.79 50.0
GSMUA_Achr7P11120_001 Banana cytosol, nucleus, plastid 55.34 49.63
VIT_19s0090g00940.t01 Wine grape cytosol 45.21 48.96
GSMUA_Achr2P15170_001 Banana cytosol 44.38 47.65
KRH14361 Soybean cytosol 41.92 44.35
Bra035784.1-P Field mustard cytosol 39.73 43.28
CDY54644 Canola cytosol 39.73 43.28
PGSC0003DMT400033487 Potato cytosol 43.29 43.05
PGSC0003DMT400037378 Potato cytosol 31.78 39.19
Solyc12g014410.1.1 Tomato cytosol, nucleus, plastid 41.92 39.13
CDY29825 Canola plastid 39.73 38.67
AT3G20420.1 Thale cress plastid 38.9 36.32
TraesCS7B01G248100.1 Wheat cytosol 28.22 33.33
AT5G45150.1 Thale cress cytosol 29.04 11.08
TraesCS1B01G177600.1 Wheat nucleus 27.67 9.75
TraesCS4B01G347300.1 Wheat cytosol, nucleus, plastid 33.7 6.21
TraesCS3B01G450600.3 Wheat nucleus 27.95 6.08
TraesCS2B01G383300.2 Wheat plastid 27.95 5.93
TraesCS5B01G079900.1 Wheat cytosol, mitochondrion, nucleus, plastid 21.92 5.92
Protein Annotations
Gene3D:1.10.1520.10MapMan:12.5.1.12Gene3D:3.30.160.20GO:GO:0003674GO:GO:0003824GO:GO:0004518
GO:GO:0004525GO:GO:0006139GO:GO:0006396GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787InterPro:IPR000999InterPro:IPR014720InterPro:IPR036389PFAM:PF00035PFAM:PF00636
PFAM:PF14709ScanProsite:PS00517PFscan:PS50137PFscan:PS50142PANTHER:PTHR14950PANTHER:PTHR14950:SF35
InterPro:RNase_III_domInterPro:RNase_III_sfSMART:SM00358SMART:SM00535SUPFAM:SSF54768SUPFAM:SSF69065
EnsemblPlantsGene:TraesCS7B01G428200EnsemblPlants:TraesCS7B01G428200.1TIGR:cd00048TIGR:cd00593InterPro:dsRBD_domSEG:seg
Description
No Description!
Coordinates
chr7B:+:697284007..697309616
Molecular Weight (calculated)
39994.4 Da
IEP (calculated)
8.757
GRAVY (calculated)
-0.252
Length
365 amino acids
Sequence
(BLAST)
001: MKRKRKRASS PAPSGPVTLP LPGFVAVREE AAARVERLLR YRFHDRSLLE EALTHQSFAA ASYQRLEFVG DAALGLAFSN YLYVTNPTVG PGTLSTLRAA
101: NINTEKLARV AVRHDLYPLL RRNCPRLDLL AGQFIESVKQ ELEDDLGTTP YGGSDVKAPK VLADIVEAIA AAVYVDCKFN LEKLWKVTRF LFEPIITAET
201: IDEKPVSTLH ELCQKLGKDL EFKPRQTGGT TVVDVIVGGV LVGMGSSKQM GIAKLNATRD ALSKLLGGGN QQVLTTGVGN GEGVEVGELR ECKQKLNEQC
301: SKKHWPKPIF KLEKEDGPAH DTTFVYSVQV ETQGGTCVTI GEPMSRVKDP ENSGAHKMLQ HLMKL
Best Arabidopsis Sequence Match ( AT1G01040.1 )
(BLAST)
0001: MVMEDEPREA TIKPSYWLDA CEDISCDLID DLVSEFDPSS VAVNESTDEN GVINDFFGGI DHILDSIKNG GGLPNNGVSD TNSQINEVTV TPQVIAKETV
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
Arabidopsis Description
DCL1Dicer-like 1 [Source:UniProtKB/TrEMBL;Acc:F4HQG6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.