Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G428200.1 | Wheat | mitochondrion | 92.01 | 91.51 |
| TraesCS7A01G513500.1 | Wheat | nucleus | 75.21 | 86.12 |
| TraesCS7A01G513400.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 86.5 | 84.64 |
| Os05t0271300-00 | Rice | cytosol, nucleus, plastid | 67.77 | 77.6 |
| Zm00001d009879_P002 | Maize | plastid | 77.41 | 74.73 |
| KXG21693 | Sorghum | plastid | 76.03 | 62.44 |
| GSMUA_Achr7P11130_001 | Banana | cytosol, nucleus, plastid | 53.99 | 57.48 |
| VIT_19s0090g00940.t01 | Wine grape | cytosol | 46.01 | 49.55 |
| GSMUA_Achr7P11120_001 | Banana | cytosol, nucleus, plastid | 55.37 | 49.39 |
| Solyc10g006210.1.1 | Tomato | cytosol | 14.6 | 49.07 |
| GSMUA_Achr2P15170_001 | Banana | cytosol | 45.73 | 48.82 |
| PGSC0003DMT400033487 | Potato | cytosol | 45.73 | 45.23 |
| KRH14361 | Soybean | cytosol | 41.87 | 44.06 |
| CDY54644 | Canola | cytosol | 40.5 | 43.88 |
| Bra035784.1-P | Field mustard | cytosol | 40.5 | 43.88 |
| Solyc12g014410.1.1 | Tomato | cytosol, nucleus, plastid | 44.9 | 41.69 |
| PGSC0003DMT400037378 | Potato | cytosol | 32.51 | 39.86 |
| CDY29825 | Canola | plastid | 40.5 | 39.2 |
| AT3G20420.1 | Thale cress | plastid | 39.94 | 37.08 |
| TraesCS7A01G336500.1 | Wheat | cytosol | 28.37 | 33.01 |
| AT5G45150.1 | Thale cress | cytosol | 30.85 | 11.7 |
| TraesCS2A01G364700.2 | Wheat | cytosol | 28.93 | 6.47 |
| TraesCS5A01G516000.1 | Wheat | cytosol, nucleus, plastid | 34.71 | 6.39 |
| TraesCS1A01G160900.1 | Wheat | nucleus | 28.37 | 6.33 |
| TraesCS3A01G415400.2 | Wheat | nucleus | 28.37 | 6.14 |
| TraesCS5A01G073600.1 | Wheat | cytosol, nucleus, plastid | 22.31 | 5.79 |
Protein Annotations
| Gene3D:1.10.1520.10 | MapMan:12.5.1.12 | Gene3D:3.30.160.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004525 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | InterPro:IPR000999 | InterPro:IPR014720 | InterPro:IPR036389 | PFAM:PF00035 | PFAM:PF00636 |
| PFAM:PF14709 | ScanProsite:PS00517 | PFscan:PS50137 | PFscan:PS50142 | PANTHER:PTHR14950 | PANTHER:PTHR14950:SF35 |
| InterPro:RNase_III_dom | InterPro:RNase_III_sf | SMART:SM00358 | SMART:SM00535 | SUPFAM:SSF54768 | SUPFAM:SSF69065 |
| EnsemblPlantsGene:TraesCS7A01G512700 | EnsemblPlants:TraesCS7A01G512700.1 | TIGR:cd00048 | TIGR:cd00593 | InterPro:dsRBD_dom | SEG:seg |
Description
No Description!
Coordinates
chr7A:+:699900899..699906954
Molecular Weight (calculated)
39769.9 Da
IEP (calculated)
7.893
GRAVY (calculated)
-0.259
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRKRASSPA PSGPVTLRPP GFVADRAEAA ARVERLLRYE FHDRSLLEEA LTHQSFAAAS YQRLEFVGDA ALGLAFSNFL YLTNPTVGPG ALSTLRAANI
101: NTEKLARVAV RHDLYPLLRR NCPRLDLLAG QFIESVKEEL EDDLGTTPYG GSDVKAPKVL ADIVEAIAAA VYVDCKFNLE KLWKVTRFLF EPIITAETID
201: EQPVSMLHEL CQKHGKDLEF KPRQKGGTTV VDVIVGGALV GMGSSKHMGI AKLNATRDAL SKLLGGGSQQ VLTTGVGHGE GHEVGELREC KQKLNEQCSR
301: KHWPKPIFKL EKEDGPAHDR TFVYSVQVET PGASCVTIGD PMSRVKDAEN SGAHKMLEYL LKL
101: NTEKLARVAV RHDLYPLLRR NCPRLDLLAG QFIESVKEEL EDDLGTTPYG GSDVKAPKVL ADIVEAIAAA VYVDCKFNLE KLWKVTRFLF EPIITAETID
201: EQPVSMLHEL CQKHGKDLEF KPRQKGGTTV VDVIVGGALV GMGSSKHMGI AKLNATRDAL SKLLGGGSQQ VLTTGVGHGE GHEVGELREC KQKLNEQCSR
301: KHWPKPIFKL EKEDGPAHDR TFVYSVQVET PGASCVTIGD PMSRVKDAEN SGAHKMLEYL LKL
001: MPIEKIRNKD CLDVDLEDVK GKSFEICSTE LFSLSTVSEN SLTDEMSQEE VVIDEDSPNV EPEDVKGKLF EICYTRKLQI QTGSSGNPLT YEMTTKQMVV
101: DKDSLHVEPV NGRGELIEIC TKNKWPRPIF SVQEEKGPKN EPKFVCSVKI EIPNIEGTFH MKGDIKSKKK QAENSLAYHM IRALESSLVS LVISNLQKPK
201: SLDEKNNPLL FSSEMDSSVE AVEKILNYSF VNKTLLKELL THNNSPLFQG LMFVGESALS LAFTKHLYLT YPMLEPKDLS VLRDANTCHD KYACVAVKKG
301: IYQSFIGSVP KPEKMTTDFI ELMGKEDDPY RVVKAPKILV NLLAGVAGAV YIDVKYNVQR LLEIFRVLLE PIYTLDDLRM QLKQPFLMLF RLADKHGKQI
401: DFRYSKDGGS RKNIAQVYMD DMFIASGCAK RIDTAKLLAA EEAIQKLSEC MPIEKIIHQD NLDGEVIQTG SSSLLTAFEN PLTEEMTQEQ MVIDEDSLDV
501: EWKLFETEEL QIQTGSSSMS TVSENPLPCE ITPTKMVIGE VSPHVELEDV KGKSFEISST ETSSLPIAFE NPLTNELTQE QMVIDENSPY VEPVDTKGKL
601: FESCSVESSS LPTTSENPST YEMTTKQMVV DKDSPHVEPE DEKGKLFEIC AKNKWPNPIF SVEEERGQQN EQKIVCSVKI EIPNIEGTFH IKGDAKPTKK
701: EAENSSADHM IRALESSVMS LVITNLQMHE NLDGKKKNLQ MKESLNENKT LLHSTKRRRR L
101: DKDSLHVEPV NGRGELIEIC TKNKWPRPIF SVQEEKGPKN EPKFVCSVKI EIPNIEGTFH MKGDIKSKKK QAENSLAYHM IRALESSLVS LVISNLQKPK
201: SLDEKNNPLL FSSEMDSSVE AVEKILNYSF VNKTLLKELL THNNSPLFQG LMFVGESALS LAFTKHLYLT YPMLEPKDLS VLRDANTCHD KYACVAVKKG
301: IYQSFIGSVP KPEKMTTDFI ELMGKEDDPY RVVKAPKILV NLLAGVAGAV YIDVKYNVQR LLEIFRVLLE PIYTLDDLRM QLKQPFLMLF RLADKHGKQI
401: DFRYSKDGGS RKNIAQVYMD DMFIASGCAK RIDTAKLLAA EEAIQKLSEC MPIEKIIHQD NLDGEVIQTG SSSLLTAFEN PLTEEMTQEQ MVIDEDSLDV
501: EWKLFETEEL QIQTGSSSMS TVSENPLPCE ITPTKMVIGE VSPHVELEDV KGKSFEISST ETSSLPIAFE NPLTNELTQE QMVIDENSPY VEPVDTKGKL
601: FESCSVESSS LPTTSENPST YEMTTKQMVV DKDSPHVEPE DEKGKLFEIC AKNKWPNPIF SVEEERGQQN EQKIVCSVKI EIPNIEGTFH IKGDAKPTKK
701: EAENSSADHM IRALESSVMS LVITNLQMHE NLDGKKKNLQ MKESLNENKT LLHSTKRRRR L
Arabidopsis Description
RTL3Ribonuclease 3-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKF0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.