Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G362700.1 | Wheat | nucleus | 97.66 | 97.54 |
| HORVU2Hr1G088270.9 | Barley | endoplasmic reticulum | 95.38 | 94.68 |
| TraesCS2B01G383300.2 | Wheat | plastid | 98.64 | 93.14 |
| Os04t0509300-02 | Rice | cytosol | 75.91 | 74.35 |
| Zm00001d025830_P011 | Maize | cytosol, nucleus, plasma membrane | 72.52 | 73.15 |
| OQU81938 | Sorghum | mitochondrion | 72.77 | 70.93 |
| GSMUA_Achr9P22460_001 | Banana | cytosol, golgi, nucleus | 46.21 | 55.03 |
| VIT_11s0149g00120.t01 | Wine grape | cytosol | 37.89 | 49.64 |
| KRH03544 | Soybean | nucleus | 49.41 | 49.02 |
| KRH20103 | Soybean | nucleus | 49.11 | 48.69 |
| Solyc07g005030.2.1 | Tomato | cytosol | 45.96 | 48.57 |
| Bra002293.1-P | Field mustard | nucleus, plastid | 46.03 | 45.52 |
| CDY35811 | Canola | nucleus | 45.96 | 45.46 |
| CDX92469 | Canola | nucleus, plastid | 45.84 | 45.31 |
| AT5G20320.1 | Thale cress | cytosol | 45.1 | 43.01 |
| TraesCS5A01G073600.1 | Wheat | cytosol, nucleus, plastid | 26.93 | 31.24 |
| TraesCS7A01G512700.1 | Wheat | mitochondrion | 6.47 | 28.93 |
| TraesCS7A01G336500.1 | Wheat | cytosol | 5.55 | 28.85 |
| TraesCS7A01G513400.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 6.53 | 28.57 |
| PGSC0003DMT400019213 | Potato | cytosol, peroxisome, vacuole | 7.09 | 28.47 |
| TraesCS1A01G160900.1 | Wheat | nucleus | 28.34 | 28.27 |
| TraesCS7A01G513500.1 | Wheat | nucleus | 5.42 | 27.76 |
| TraesCS3A01G415400.2 | Wheat | nucleus | 27.3 | 26.4 |
| TraesCS5A01G516000.1 | Wheat | cytosol, nucleus, plastid | 28.9 | 23.78 |
Protein Annotations
Description
No Description!
Coordinates
chr2A:-:608633299..608662115
Molecular Weight (calculated)
183865.0 Da
IEP (calculated)
6.649
GRAVY (calculated)
-0.249
Length
1623 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGDISTAAAS AGERKPKDPR TIARKYQLDL CKRALEENII VYLGTGCGKT HIAVLLIYEL GHLIRKPRRD VCIFLAPTVP LVLQQATVIA NSTNFRVQSY
0101: YGDGKNPRNH EDWETEMGES EVLVMTPQIL LHSLRHCFIK MDSIALLIFD ECHHAQAHKR HPYAQIMKEF YNNDMVKPPR IFGMTASPVM GKGGSNKLNY
0201: TKCINSLEEL LHAKVCSVDN AELESVLAFP DMEVYTYVPL SHSNLTVTYN KELDRSKLES ERILRESLYD FKDSQKKLKS LGRLHGNLVF CLQELGSFGA
0301: LQAAKAFLSS DGDVLDRKES DMNDNSTRFK HHYLNKAISV LNCNILDGTH DDSFHLEMLE EPFFSNKIVV LIKILSRYRL EENMKCIVFV KRITVARAIA
0401: HILQNLKGLD LWKCEFLVGR HSGPKNMSRQ KMDAIVENFS SGEVNLLIAT SVGEEGLDIQ TCCLVVRFDL PETVASFIQS RGRARMTNSK YVVLLERGNH
0501: SQEKLLNDYI DGEGIMNGEI DLRTSNDVFD HLEEKSYRVE KTGASISTAC SVSLLHRYCY NLPKDMFFNP SPAFIYIDDT EGIICRVILP PNAAFRQVDG
0601: QPCQSNDEAK RDACLEAYVK LYELGALTDF LLPGSGSGKN RASTTNGSAS NSHDDESLRE ELHEMLIPTI LKPSTCKLDC PLNLHFYYIQ FFPIPADRHY
0701: RIFGLFVINS LPMEAEKLEV DLHLARGRIV KAGMKHLGTI SFDEEQMMLA RNFQEMFLKV LLDRSEFTVS HVMLLGNSET LQFNSTFYLL LPIKQELYGD
0801: IFMIDWQTVK RCLSSPVFKD PTGVSAHGSY LPDESLRLLD NMYSKTDVVG SLIFAPHIKT FFVIDVILNE LNARSEYDGA TYEDHYKERF GIKLSHPEQP
0901: LLHAKQLCNL HNLLHDRLRE TTEEGRELME HFVELPPELC SLKIIGFSKD MCSSLSLLPS LMCRLENLLV AIELKDVMLS SFSEASQISA SGILEALTTE
1001: RCLERISLER FEVLGDAFLK YVVGRHNFLT YEGLDEGQLT SRRSAIVNNS HLYELSIKRN LQVYIRDQHF EPTQFIALGR PCKVVCNADT EVNIHTDSRE
1101: NCNLRCTKSH HWLHRKTIAD AVESLVGAFL VEGGFKAAFA FLHWVGIDVD FKDSSLYRVL DASSINLSLT NHTDVGELEE LIGYNFKHKG LILEAFVHPS
1201: FNKHSGGCYQ KLEFLGDAVL EYLITSYLYS AYPDLKPGQI TDLKSLAVSN NSLAYVAVQK GIHKYLIKDS NYLSSAVNKF ENYIRLPNSE KDLVEEPACP
1301: KVLGDIVESC VAAVLLDSGF NLNYVWTLVL MLLKPVLSFS DMHMNPMREI RELCQSHELE LGLPEPMKAD GEYHVKVEVN INSQVISSAA ANRNSKVARK
1401: FAAQETLSKL KNYGYTHKNK SLEEILRDAR KKEPELLGYN EEPIKVEADI SAETNNLKIG KERDANISFQ NTAISIRGTL RTSSQRTAGN TMFSKDDVSI
1501: ERNNQLKVAK QNACLPKGTT QKNIRKEYHG DMVNKTAKSF LFEVCAVSYW IPPEFELCKE EGPSHLRRFT YKVTVQIRGP SETLLECYSD AQLHKKAAQE
1601: HAAQGALWYL RQHGYLAKDE VRV
0101: YGDGKNPRNH EDWETEMGES EVLVMTPQIL LHSLRHCFIK MDSIALLIFD ECHHAQAHKR HPYAQIMKEF YNNDMVKPPR IFGMTASPVM GKGGSNKLNY
0201: TKCINSLEEL LHAKVCSVDN AELESVLAFP DMEVYTYVPL SHSNLTVTYN KELDRSKLES ERILRESLYD FKDSQKKLKS LGRLHGNLVF CLQELGSFGA
0301: LQAAKAFLSS DGDVLDRKES DMNDNSTRFK HHYLNKAISV LNCNILDGTH DDSFHLEMLE EPFFSNKIVV LIKILSRYRL EENMKCIVFV KRITVARAIA
0401: HILQNLKGLD LWKCEFLVGR HSGPKNMSRQ KMDAIVENFS SGEVNLLIAT SVGEEGLDIQ TCCLVVRFDL PETVASFIQS RGRARMTNSK YVVLLERGNH
0501: SQEKLLNDYI DGEGIMNGEI DLRTSNDVFD HLEEKSYRVE KTGASISTAC SVSLLHRYCY NLPKDMFFNP SPAFIYIDDT EGIICRVILP PNAAFRQVDG
0601: QPCQSNDEAK RDACLEAYVK LYELGALTDF LLPGSGSGKN RASTTNGSAS NSHDDESLRE ELHEMLIPTI LKPSTCKLDC PLNLHFYYIQ FFPIPADRHY
0701: RIFGLFVINS LPMEAEKLEV DLHLARGRIV KAGMKHLGTI SFDEEQMMLA RNFQEMFLKV LLDRSEFTVS HVMLLGNSET LQFNSTFYLL LPIKQELYGD
0801: IFMIDWQTVK RCLSSPVFKD PTGVSAHGSY LPDESLRLLD NMYSKTDVVG SLIFAPHIKT FFVIDVILNE LNARSEYDGA TYEDHYKERF GIKLSHPEQP
0901: LLHAKQLCNL HNLLHDRLRE TTEEGRELME HFVELPPELC SLKIIGFSKD MCSSLSLLPS LMCRLENLLV AIELKDVMLS SFSEASQISA SGILEALTTE
1001: RCLERISLER FEVLGDAFLK YVVGRHNFLT YEGLDEGQLT SRRSAIVNNS HLYELSIKRN LQVYIRDQHF EPTQFIALGR PCKVVCNADT EVNIHTDSRE
1101: NCNLRCTKSH HWLHRKTIAD AVESLVGAFL VEGGFKAAFA FLHWVGIDVD FKDSSLYRVL DASSINLSLT NHTDVGELEE LIGYNFKHKG LILEAFVHPS
1201: FNKHSGGCYQ KLEFLGDAVL EYLITSYLYS AYPDLKPGQI TDLKSLAVSN NSLAYVAVQK GIHKYLIKDS NYLSSAVNKF ENYIRLPNSE KDLVEEPACP
1301: KVLGDIVESC VAAVLLDSGF NLNYVWTLVL MLLKPVLSFS DMHMNPMREI RELCQSHELE LGLPEPMKAD GEYHVKVEVN INSQVISSAA ANRNSKVARK
1401: FAAQETLSKL KNYGYTHKNK SLEEILRDAR KKEPELLGYN EEPIKVEADI SAETNNLKIG KERDANISFQ NTAISIRGTL RTSSQRTAGN TMFSKDDVSI
1501: ERNNQLKVAK QNACLPKGTT QKNIRKEYHG DMVNKTAKSF LFEVCAVSYW IPPEFELCKE EGPSHLRRFT YKVTVQIRGP SETLLECYSD AQLHKKAAQE
1601: HAAQGALWYL RQHGYLAKDE VRV
0001: MRDEVDLSLT IPSKLLGKRD REQKNCEEEK NKNKKAKKQQ KDPILLHTSA ATHKFLPPPL TMPYSEIGDD LRSLDFDHAD VSSDLHLTSS SSVSSFSSSS
0101: SSLFSAAGTD DPSPKMEKDP RKIARRYQVE LCKKATEENV IVYLGTGCGK THIAVMLIYE LGHLVLSPKK SVCIFLAPTV ALVEQQAKVI ADSVNFKVAI
0201: HCGGKRIVKS HSEWEREIAA NEVLVMTPQI LLHNLQHCFI KMECISLLIF DECHHAQQQS NHPYAEIMKV FYKSESLQRP RIFGMTASPV VGKGSFQSEN
0301: LSKSINSLEN LLNAKVYSVE SNVQLDGFVS SPLVKVYYYR SALSDASQST IRYENMLEDI KQRCLASLKL LIDTHQTQTL LSMKRLLKRS HDNLIYTLLN
0401: LGLWGAIQAA KIQLNSDHNV QDEPVGKNPK SKICDTYLSM AAEALSSGVA KDENASDLLS LAALKEPLFS RKLVQLIKIL SVFRLEPHMK CIIFVNRIVT
0501: ARTLSCILNN LELLRSWKSD FLVGLSSGLK SMSRRSMETI LKRFQSKELN LLVATKVGEE GLDIQTCCLV IRYDLPETVT SFIQSRGRAR MPQSEYAFLV
0601: DSGNEKEMDL IENFKVNEDR MNLEITYRSS EETCPRLDEE LYKVHETGAC ISGGSSISLL YKYCSRLPHD EFFQPKPEFQ FKPVDEFGGT ICRITLPANA
0701: PISEIESSLL PSTEAAKKDA CLKAVHELHN LGVLNDFLLP DSKDEIEDEL SDDEFDFDNI KGEGCSRGDL YEMRVPVLFK QKWDPSTSCV NLHSYYIMFV
0801: PHPADRIYKK FGFFMKSPLP VEAETMDIDL HLAHQRSVSV KIFPSGVTEF DNDEIRLAEL FQEIALKVLF ERGELIPDFV PLELQDSSRT SKSTFYLLLP
0901: LCLHDGESVI SVDWVTIRNC LSSPIFKTPS VLVEDIFPPS GSHLKLANGC WNIDDVKNSL VFTTYSKQFY FVADICHGRN GFSPVKESST KSHVESIYKL
1001: YGVELKHPAQ PLLRVKPLCH VRNLLHNRMQ TNLEPQELDE YFIEIPPELS HLKIKGLSKD IGSSLSLLPS IMHRMENLLV AIELKHVLSA SIPEIAEVSG
1101: HRVLEALTTE KCHERLSLER LEVLGDAFLK FAVSRHLFLH HDSLDEGELT RRRSNVVNNS NLCRLAIKKN LQVYIRDQAL DPTQFFAFGH PCRVTCDEVA
1201: SKEVHSLNRD LGILESNTGE IRCSKGHHWL YKKTIADVVE ALVGAFLVDS GFKGAVKFLK WIGVNVDFES LQVQDACIAS RRYLPLTTRN NLETLENQLD
1301: YKFLHKGLLV QAFIHPSYNR HGGGCYQRLE FLGDAVLDYL MTSYFFTVFP KLKPGQLTDL RSLSVNNEAL ANVAVSFSLK RFLFCESIYL HEVIEDYTNF
1401: LASSPLASGQ SEGPRCPKVL GDLVESCLGA LFLDCGFNLN HVWTMMLSFL DPVKNLSNLQ ISPIKELIEL CQSYKWDREI SATKKDGAFT VELKVTKNGC
1501: CLTVSATGRN KREGTKKAAQ LMITNLKAHE NITTSHPLED VLKNGIRNEA KLIGYNEDPI DVVDLVGLDV ENLNILETFG GNSERSSSYV IRRGLPQAPS
1601: KTEDRLPQKA IIKAGGPSSK TAKSLLHETC VANCWKPPHF ECCEEEGPGH LKSFVYKVIL EVEDAPNMTL ECYGEARATK KGAAEHAAQA AIWCLKHSGF
1701: LC
0101: SSLFSAAGTD DPSPKMEKDP RKIARRYQVE LCKKATEENV IVYLGTGCGK THIAVMLIYE LGHLVLSPKK SVCIFLAPTV ALVEQQAKVI ADSVNFKVAI
0201: HCGGKRIVKS HSEWEREIAA NEVLVMTPQI LLHNLQHCFI KMECISLLIF DECHHAQQQS NHPYAEIMKV FYKSESLQRP RIFGMTASPV VGKGSFQSEN
0301: LSKSINSLEN LLNAKVYSVE SNVQLDGFVS SPLVKVYYYR SALSDASQST IRYENMLEDI KQRCLASLKL LIDTHQTQTL LSMKRLLKRS HDNLIYTLLN
0401: LGLWGAIQAA KIQLNSDHNV QDEPVGKNPK SKICDTYLSM AAEALSSGVA KDENASDLLS LAALKEPLFS RKLVQLIKIL SVFRLEPHMK CIIFVNRIVT
0501: ARTLSCILNN LELLRSWKSD FLVGLSSGLK SMSRRSMETI LKRFQSKELN LLVATKVGEE GLDIQTCCLV IRYDLPETVT SFIQSRGRAR MPQSEYAFLV
0601: DSGNEKEMDL IENFKVNEDR MNLEITYRSS EETCPRLDEE LYKVHETGAC ISGGSSISLL YKYCSRLPHD EFFQPKPEFQ FKPVDEFGGT ICRITLPANA
0701: PISEIESSLL PSTEAAKKDA CLKAVHELHN LGVLNDFLLP DSKDEIEDEL SDDEFDFDNI KGEGCSRGDL YEMRVPVLFK QKWDPSTSCV NLHSYYIMFV
0801: PHPADRIYKK FGFFMKSPLP VEAETMDIDL HLAHQRSVSV KIFPSGVTEF DNDEIRLAEL FQEIALKVLF ERGELIPDFV PLELQDSSRT SKSTFYLLLP
0901: LCLHDGESVI SVDWVTIRNC LSSPIFKTPS VLVEDIFPPS GSHLKLANGC WNIDDVKNSL VFTTYSKQFY FVADICHGRN GFSPVKESST KSHVESIYKL
1001: YGVELKHPAQ PLLRVKPLCH VRNLLHNRMQ TNLEPQELDE YFIEIPPELS HLKIKGLSKD IGSSLSLLPS IMHRMENLLV AIELKHVLSA SIPEIAEVSG
1101: HRVLEALTTE KCHERLSLER LEVLGDAFLK FAVSRHLFLH HDSLDEGELT RRRSNVVNNS NLCRLAIKKN LQVYIRDQAL DPTQFFAFGH PCRVTCDEVA
1201: SKEVHSLNRD LGILESNTGE IRCSKGHHWL YKKTIADVVE ALVGAFLVDS GFKGAVKFLK WIGVNVDFES LQVQDACIAS RRYLPLTTRN NLETLENQLD
1301: YKFLHKGLLV QAFIHPSYNR HGGGCYQRLE FLGDAVLDYL MTSYFFTVFP KLKPGQLTDL RSLSVNNEAL ANVAVSFSLK RFLFCESIYL HEVIEDYTNF
1401: LASSPLASGQ SEGPRCPKVL GDLVESCLGA LFLDCGFNLN HVWTMMLSFL DPVKNLSNLQ ISPIKELIEL CQSYKWDREI SATKKDGAFT VELKVTKNGC
1501: CLTVSATGRN KREGTKKAAQ LMITNLKAHE NITTSHPLED VLKNGIRNEA KLIGYNEDPI DVVDLVGLDV ENLNILETFG GNSERSSSYV IRRGLPQAPS
1601: KTEDRLPQKA IIKAGGPSSK TAKSLLHETC VANCWKPPHF ECCEEEGPGH LKSFVYKVIL EVEDAPNMTL ECYGEARATK KGAAEHAAQA AIWCLKHSGF
1701: LC
Arabidopsis Description
DCL4Dicer-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P84634]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.