Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G20320.1 | EER88251 | AT3G62800.1 | 24352449 |
| AT5G20320.1 | EES16051 | AT3G62800.1 | 24352449 |
| AT5G20320.1 | KXG33474 | AT3G62800.1 | 24352449 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025830_P011 | Maize | cytosol, nucleus, plasma membrane | 89.07 | 92.17 |
| Os04t0509300-02 | Rice | cytosol | 73.57 | 73.93 |
| TraesCS2A01G364700.2 | Wheat | cytosol | 70.93 | 72.77 |
| TraesCS2D01G362700.1 | Wheat | nucleus | 70.93 | 72.68 |
| HORVU2Hr1G088270.9 | Barley | endoplasmic reticulum | 70.57 | 71.87 |
| TraesCS2B01G383300.2 | Wheat | plastid | 72.25 | 69.98 |
| GSMUA_Achr9P22460_001 | Banana | cytosol, golgi, nucleus | 45.53 | 55.61 |
| VIT_11s0149g00120.t01 | Wine grape | cytosol | 37.72 | 50.69 |
| KRH03544 | Soybean | nucleus | 48.65 | 49.51 |
| KRH20103 | Soybean | nucleus | 48.59 | 49.42 |
| Solyc07g005030.2.1 | Tomato | cytosol | 44.38 | 48.11 |
| CDY35811 | Canola | nucleus | 45.95 | 46.62 |
| CDX92469 | Canola | nucleus, plastid | 45.77 | 46.41 |
| Bra002293.1-P | Field mustard | nucleus, plastid | 45.71 | 46.37 |
| AT5G20320.1 | Thale cress | cytosol | 45.71 | 44.71 |
| OQU91441 | Sorghum | nucleus | 26.13 | 31.39 |
| PGSC0003DMT400019213 | Potato | cytosol, peroxisome, vacuole | 7.33 | 30.2 |
| KXG33962 | Sorghum | nucleus | 29.19 | 29.33 |
| KXG38096 | Sorghum | plastid | 13.27 | 28.41 |
| OQU91611 | Sorghum | nucleus, plastid | 27.63 | 28.1 |
| EES13704 | Sorghum | cytosol | 4.86 | 27.84 |
| KXG40313 | Sorghum | cytosol, nucleus, plastid | 29.07 | 25.09 |
| KXG21693 | Sorghum | plastid | 6.61 | 24.89 |
Protein Annotations
| Gene3D:1.10.1520.10 | MapMan:16.10.1.3 | MapMan:16.10.1.4.2 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 | Gene3D:3.30.160.380 |
| Gene3D:3.40.50.300 | UniProt:A0A1Z5RDX5 | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom | GO:GO:0000003 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004525 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006353 | GO:GO:0006396 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009616 | GO:GO:0009791 | GO:GO:0009944 | GO:GO:0009987 | GO:GO:0010050 |
| GO:GO:0010216 | GO:GO:0010267 | GO:GO:0010492 | GO:GO:0010599 | GO:GO:0016787 | GO:GO:0016891 |
| GO:GO:0040029 | GO:GO:0048608 | GO:GO:0051214 | GO:GO:0051607 | GO:GO:0090501 | GO:GO:0090502 |
| InterPro:Helicase/UvrB_N | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 | InterPro:IPR003100 |
| InterPro:IPR005034 | InterPro:IPR014001 | InterPro:IPR014720 | InterPro:IPR036389 | InterPro:IPR038248 | EnsemblPlants:OQU81938 |
| ProteinID:OQU81938 | ProteinID:OQU81938.1 | InterPro:P-loop_NTPase | InterPro:PAZ_dom | PFAM:PF00035 | PFAM:PF00271 |
| PFAM:PF00636 | PFAM:PF02170 | PFAM:PF03368 | PFAM:PF04851 | PFAM:PF14709 | ScanProsite:PS00517 |
| PFscan:PS50137 | PFscan:PS50142 | PFscan:PS50821 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51327 |
| PANTHER:PTHR14950 | PANTHER:PTHR14950:SF15 | InterPro:RNase_III_dom | InterPro:RNase_III_sf | SMART:SM00358 | SMART:SM00487 |
| SMART:SM00490 | SMART:SM00535 | SMART:SM00949 | EnsemblPlantsGene:SORBI_3006G142775 | SUPFAM:SSF52540 | SUPFAM:SSF54768 |
| SUPFAM:SSF69065 | UniParc:UPI000B8BADD7 | InterPro:dsRBD_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:-:50484294..50509497
Molecular Weight (calculated)
188362.0 Da
IEP (calculated)
6.979
GRAVY (calculated)
-0.238
Length
1665 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLTSFIITRG TRTAVSHTRT SASVLLCSVL FLSPRILILP LEASAMGEGE DEAGSSSSGA AAGEPKDPRR IARKYQLDLC KRAVEENIVV YLGTGCGKTH
0101: IAVLLMYELG HLIRKPSREV CIFLAPTIPL VRQQAMVIAD STNFKVQRYY GSGKNSRDHQ AWEKEIGEYE VLVMTPQILL HNLRHCFIKM DSIALLIFDE
0201: CHHAQAQKRH PYAQIMKEFY NNADKHPRVF GMTASPIIGK GGSNKLTYTK CINSLEELLN AKVCSVDNVE LESVIASPKI EVYFYDPVGH SNLTTTYINE
0301: LDGYKSQSEY MLRESACNFK ESQKKLKSLW RLHENLIFCL QEVGLFGALQ AARTFLSPSS VSLDGKGVDI NYYVNKATSL LSRDILEGAD ADSFDLETIK
0401: EPFFSKKFAV LIDVLSRYRL EENTKCIVFV KRIIVARVVA HILKKLKCLD FWKCECLVGC HSGLRNMSRD KMGSIIEKFS SGEVNLLVAT SVGEEGLDIQ
0501: TCCLVVRFDL PETVNSFIQS RGRARMSKSK YVFLLERGNQ SQEKLLDDYI TGESIMDKEI NLRTSNDMFD CLEENIYRVN DTGASISTAC SVSLLHRYCD
0601: NLPRDMFFVP SPSFFFVDDI DGIVCRLILP PNAAFRQVNG QPCPSKDEAK RDACLKACIK LHELGALTDF LLPGQGSRKM KVSTTNISES NKDEDESFRE
0701: ELHEMLIPAV LRPSGCKLDC SLKLHFYYIE FIPKPADRRY QMFGLFVINR LPEESEKLDV ELHLAHARIV KAGIKYLGKI EFNKEEMILA HNFQEMFLKV
0801: LLDRSEFTSS YILLGNDAAL DMDSTFYLLL PIKQKFYGDN MIDWPTIKKC LSSPAFQDPM GLSLPDSYLP NESLKLLGGA YKKADVIGSL VYTPHTDLFF
0901: FVDSILDGTN AKSELNGATY EEHFKERLHI ELSHPEQPLL KAKQLFCLRN LLHNRQLEST ESEGRELMEH FVELPPELCS LKITGFSKDM GSSLSLLPSL
1001: MCRLENLLVA IELKNVMSSY FPEASQISAS GILEALTTER CLERISLERL EVLGDAFLKY VVGRHNFISY EGLDEGQLTR RRSDIVSNSN LYELSIRRNL
1101: QVYIRDQHFE PTQFFALGRP CKVVCNPDRE ATLHPKNIDP DRRENCNLRC TKSHHWLHRK TIADVVESLL GAFLVECGFK AAFAFLRWIG IKVDFENSAL
1201: YRVLDASSTN LSLMNYMNIS ELEELIGYTF KHKGLLLQAF VHPSFNKHSG GCYQRMEFLG DAVLDYLMAS YLYSAYPDLK PGQLTDLKSL ALNNNSFAYV
1301: AVKKSIHKYL IKDSKSLTAA INKFQNYVNL SSSEKDLLEE PTCPKVLGDI VESCVGAVLL DSGFNLNHVW KLMLMLLKPI LSFCGMHIDP MRELREICQY
1401: NGFELGLPKP TEDNGEFHVK VEVNIDGKMI SCTAANRNSK DARKVAAQEA LLKLKNNGYK HKRKSLEEIL RATTKKESEL IGYDEEPINV EDDIQMKNLL
1501: INGEMEGNIF FQNKEVSLNG RSETSIQSTT GDNKVDKNDA NNGRNNKSNV VVQNGCLPRG ATDKTNQREY HGDMVRKTAR SFLYELCAAN YWKPPDFELC
1601: KGEGPSHLRK FTCKVLIQIT GTSATLLECY SDPKLQKKAA HEHAAEGALW YLKQLGYLPK DDYRV
0101: IAVLLMYELG HLIRKPSREV CIFLAPTIPL VRQQAMVIAD STNFKVQRYY GSGKNSRDHQ AWEKEIGEYE VLVMTPQILL HNLRHCFIKM DSIALLIFDE
0201: CHHAQAQKRH PYAQIMKEFY NNADKHPRVF GMTASPIIGK GGSNKLTYTK CINSLEELLN AKVCSVDNVE LESVIASPKI EVYFYDPVGH SNLTTTYINE
0301: LDGYKSQSEY MLRESACNFK ESQKKLKSLW RLHENLIFCL QEVGLFGALQ AARTFLSPSS VSLDGKGVDI NYYVNKATSL LSRDILEGAD ADSFDLETIK
0401: EPFFSKKFAV LIDVLSRYRL EENTKCIVFV KRIIVARVVA HILKKLKCLD FWKCECLVGC HSGLRNMSRD KMGSIIEKFS SGEVNLLVAT SVGEEGLDIQ
0501: TCCLVVRFDL PETVNSFIQS RGRARMSKSK YVFLLERGNQ SQEKLLDDYI TGESIMDKEI NLRTSNDMFD CLEENIYRVN DTGASISTAC SVSLLHRYCD
0601: NLPRDMFFVP SPSFFFVDDI DGIVCRLILP PNAAFRQVNG QPCPSKDEAK RDACLKACIK LHELGALTDF LLPGQGSRKM KVSTTNISES NKDEDESFRE
0701: ELHEMLIPAV LRPSGCKLDC SLKLHFYYIE FIPKPADRRY QMFGLFVINR LPEESEKLDV ELHLAHARIV KAGIKYLGKI EFNKEEMILA HNFQEMFLKV
0801: LLDRSEFTSS YILLGNDAAL DMDSTFYLLL PIKQKFYGDN MIDWPTIKKC LSSPAFQDPM GLSLPDSYLP NESLKLLGGA YKKADVIGSL VYTPHTDLFF
0901: FVDSILDGTN AKSELNGATY EEHFKERLHI ELSHPEQPLL KAKQLFCLRN LLHNRQLEST ESEGRELMEH FVELPPELCS LKITGFSKDM GSSLSLLPSL
1001: MCRLENLLVA IELKNVMSSY FPEASQISAS GILEALTTER CLERISLERL EVLGDAFLKY VVGRHNFISY EGLDEGQLTR RRSDIVSNSN LYELSIRRNL
1101: QVYIRDQHFE PTQFFALGRP CKVVCNPDRE ATLHPKNIDP DRRENCNLRC TKSHHWLHRK TIADVVESLL GAFLVECGFK AAFAFLRWIG IKVDFENSAL
1201: YRVLDASSTN LSLMNYMNIS ELEELIGYTF KHKGLLLQAF VHPSFNKHSG GCYQRMEFLG DAVLDYLMAS YLYSAYPDLK PGQLTDLKSL ALNNNSFAYV
1301: AVKKSIHKYL IKDSKSLTAA INKFQNYVNL SSSEKDLLEE PTCPKVLGDI VESCVGAVLL DSGFNLNHVW KLMLMLLKPI LSFCGMHIDP MRELREICQY
1401: NGFELGLPKP TEDNGEFHVK VEVNIDGKMI SCTAANRNSK DARKVAAQEA LLKLKNNGYK HKRKSLEEIL RATTKKESEL IGYDEEPINV EDDIQMKNLL
1501: INGEMEGNIF FQNKEVSLNG RSETSIQSTT GDNKVDKNDA NNGRNNKSNV VVQNGCLPRG ATDKTNQREY HGDMVRKTAR SFLYELCAAN YWKPPDFELC
1601: KGEGPSHLRK FTCKVLIQIT GTSATLLECY SDPKLQKKAA HEHAAEGALW YLKQLGYLPK DDYRV
0001: MRDEVDLSLT IPSKLLGKRD REQKNCEEEK NKNKKAKKQQ KDPILLHTSA ATHKFLPPPL TMPYSEIGDD LRSLDFDHAD VSSDLHLTSS SSVSSFSSSS
0101: SSLFSAAGTD DPSPKMEKDP RKIARRYQVE LCKKATEENV IVYLGTGCGK THIAVMLIYE LGHLVLSPKK SVCIFLAPTV ALVEQQAKVI ADSVNFKVAI
0201: HCGGKRIVKS HSEWEREIAA NEVLVMTPQI LLHNLQHCFI KMECISLLIF DECHHAQQQS NHPYAEIMKV FYKSESLQRP RIFGMTASPV VGKGSFQSEN
0301: LSKSINSLEN LLNAKVYSVE SNVQLDGFVS SPLVKVYYYR SALSDASQST IRYENMLEDI KQRCLASLKL LIDTHQTQTL LSMKRLLKRS HDNLIYTLLN
0401: LGLWGAIQAA KIQLNSDHNV QDEPVGKNPK SKICDTYLSM AAEALSSGVA KDENASDLLS LAALKEPLFS RKLVQLIKIL SVFRLEPHMK CIIFVNRIVT
0501: ARTLSCILNN LELLRSWKSD FLVGLSSGLK SMSRRSMETI LKRFQSKELN LLVATKVGEE GLDIQTCCLV IRYDLPETVT SFIQSRGRAR MPQSEYAFLV
0601: DSGNEKEMDL IENFKVNEDR MNLEITYRSS EETCPRLDEE LYKVHETGAC ISGGSSISLL YKYCSRLPHD EFFQPKPEFQ FKPVDEFGGT ICRITLPANA
0701: PISEIESSLL PSTEAAKKDA CLKAVHELHN LGVLNDFLLP DSKDEIEDEL SDDEFDFDNI KGEGCSRGDL YEMRVPVLFK QKWDPSTSCV NLHSYYIMFV
0801: PHPADRIYKK FGFFMKSPLP VEAETMDIDL HLAHQRSVSV KIFPSGVTEF DNDEIRLAEL FQEIALKVLF ERGELIPDFV PLELQDSSRT SKSTFYLLLP
0901: LCLHDGESVI SVDWVTIRNC LSSPIFKTPS VLVEDIFPPS GSHLKLANGC WNIDDVKNSL VFTTYSKQFY FVADICHGRN GFSPVKESST KSHVESIYKL
1001: YGVELKHPAQ PLLRVKPLCH VRNLLHNRMQ TNLEPQELDE YFIEIPPELS HLKIKGLSKD IGSSLSLLPS IMHRMENLLV AIELKHVLSA SIPEIAEVSG
1101: HRVLEALTTE KCHERLSLER LEVLGDAFLK FAVSRHLFLH HDSLDEGELT RRRSNVVNNS NLCRLAIKKN LQVYIRDQAL DPTQFFAFGH PCRVTCDEVA
1201: SKEVHSLNRD LGILESNTGE IRCSKGHHWL YKKTIADVVE ALVGAFLVDS GFKGAVKFLK WIGVNVDFES LQVQDACIAS RRYLPLTTRN NLETLENQLD
1301: YKFLHKGLLV QAFIHPSYNR HGGGCYQRLE FLGDAVLDYL MTSYFFTVFP KLKPGQLTDL RSLSVNNEAL ANVAVSFSLK RFLFCESIYL HEVIEDYTNF
1401: LASSPLASGQ SEGPRCPKVL GDLVESCLGA LFLDCGFNLN HVWTMMLSFL DPVKNLSNLQ ISPIKELIEL CQSYKWDREI SATKKDGAFT VELKVTKNGC
1501: CLTVSATGRN KREGTKKAAQ LMITNLKAHE NITTSHPLED VLKNGIRNEA KLIGYNEDPI DVVDLVGLDV ENLNILETFG GNSERSSSYV IRRGLPQAPS
1601: KTEDRLPQKA IIKAGGPSSK TAKSLLHETC VANCWKPPHF ECCEEEGPGH LKSFVYKVIL EVEDAPNMTL ECYGEARATK KGAAEHAAQA AIWCLKHSGF
1701: LC
0101: SSLFSAAGTD DPSPKMEKDP RKIARRYQVE LCKKATEENV IVYLGTGCGK THIAVMLIYE LGHLVLSPKK SVCIFLAPTV ALVEQQAKVI ADSVNFKVAI
0201: HCGGKRIVKS HSEWEREIAA NEVLVMTPQI LLHNLQHCFI KMECISLLIF DECHHAQQQS NHPYAEIMKV FYKSESLQRP RIFGMTASPV VGKGSFQSEN
0301: LSKSINSLEN LLNAKVYSVE SNVQLDGFVS SPLVKVYYYR SALSDASQST IRYENMLEDI KQRCLASLKL LIDTHQTQTL LSMKRLLKRS HDNLIYTLLN
0401: LGLWGAIQAA KIQLNSDHNV QDEPVGKNPK SKICDTYLSM AAEALSSGVA KDENASDLLS LAALKEPLFS RKLVQLIKIL SVFRLEPHMK CIIFVNRIVT
0501: ARTLSCILNN LELLRSWKSD FLVGLSSGLK SMSRRSMETI LKRFQSKELN LLVATKVGEE GLDIQTCCLV IRYDLPETVT SFIQSRGRAR MPQSEYAFLV
0601: DSGNEKEMDL IENFKVNEDR MNLEITYRSS EETCPRLDEE LYKVHETGAC ISGGSSISLL YKYCSRLPHD EFFQPKPEFQ FKPVDEFGGT ICRITLPANA
0701: PISEIESSLL PSTEAAKKDA CLKAVHELHN LGVLNDFLLP DSKDEIEDEL SDDEFDFDNI KGEGCSRGDL YEMRVPVLFK QKWDPSTSCV NLHSYYIMFV
0801: PHPADRIYKK FGFFMKSPLP VEAETMDIDL HLAHQRSVSV KIFPSGVTEF DNDEIRLAEL FQEIALKVLF ERGELIPDFV PLELQDSSRT SKSTFYLLLP
0901: LCLHDGESVI SVDWVTIRNC LSSPIFKTPS VLVEDIFPPS GSHLKLANGC WNIDDVKNSL VFTTYSKQFY FVADICHGRN GFSPVKESST KSHVESIYKL
1001: YGVELKHPAQ PLLRVKPLCH VRNLLHNRMQ TNLEPQELDE YFIEIPPELS HLKIKGLSKD IGSSLSLLPS IMHRMENLLV AIELKHVLSA SIPEIAEVSG
1101: HRVLEALTTE KCHERLSLER LEVLGDAFLK FAVSRHLFLH HDSLDEGELT RRRSNVVNNS NLCRLAIKKN LQVYIRDQAL DPTQFFAFGH PCRVTCDEVA
1201: SKEVHSLNRD LGILESNTGE IRCSKGHHWL YKKTIADVVE ALVGAFLVDS GFKGAVKFLK WIGVNVDFES LQVQDACIAS RRYLPLTTRN NLETLENQLD
1301: YKFLHKGLLV QAFIHPSYNR HGGGCYQRLE FLGDAVLDYL MTSYFFTVFP KLKPGQLTDL RSLSVNNEAL ANVAVSFSLK RFLFCESIYL HEVIEDYTNF
1401: LASSPLASGQ SEGPRCPKVL GDLVESCLGA LFLDCGFNLN HVWTMMLSFL DPVKNLSNLQ ISPIKELIEL CQSYKWDREI SATKKDGAFT VELKVTKNGC
1501: CLTVSATGRN KREGTKKAAQ LMITNLKAHE NITTSHPLED VLKNGIRNEA KLIGYNEDPI DVVDLVGLDV ENLNILETFG GNSERSSSYV IRRGLPQAPS
1601: KTEDRLPQKA IIKAGGPSSK TAKSLLHETC VANCWKPPHF ECCEEEGPGH LKSFVYKVIL EVEDAPNMTL ECYGEARATK KGAAEHAAQA AIWCLKHSGF
1701: LC
Arabidopsis Description
DCL4Dicer-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P84634]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.