Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027412_P004 | Maize | cytosol, nucleus, plastid | 96.32 | 96.22 |
| Os03t0121800-01 | Rice | cytosol, nucleus, plasma membrane | 87.45 | 89.59 |
| TraesCS5A01G516000.1 | Wheat | cytosol, nucleus, plastid | 86.52 | 84.63 |
| TraesCS4B01G347300.1 | Wheat | cytosol, nucleus, plastid | 86.57 | 84.3 |
| HORVU4Hr1G084890.7 | Barley | cytosol, nucleus, plastid | 86.78 | 83.83 |
| TraesCS4D01G342300.1 | Wheat | mitochondrion | 86.42 | 82.36 |
| GSMUA_Achr8P12350_001 | Banana | nucleus | 71.95 | 76.35 |
| KRG97266 | Soybean | cytosol, nucleus, plastid | 74.13 | 73.52 |
| KRH68982 | Soybean | cytosol, nucleus, plastid | 73.92 | 73.24 |
| VIT_15s0048g02380.t01 | Wine grape | cytosol, nucleus, plastid | 73.46 | 72.74 |
| Bra033293.1-P | Field mustard | cytosol, nucleus, plastid | 69.21 | 72.32 |
| CDX90002 | Canola | nucleus | 67.81 | 72.19 |
| CDY15207 | Canola | nucleus | 67.6 | 72.08 |
| AT1G01040.2 | Thale cress | nucleus | 70.45 | 71.15 |
| Solyc10g005130.2.1 | Tomato | nucleus | 68.95 | 70.44 |
| PGSC0003DMT400029301 | Potato | nucleus | 69.83 | 70.38 |
| EES13704 | Sorghum | cytosol | 5.39 | 35.74 |
| OQU91441 | Sorghum | nucleus | 23.54 | 32.76 |
| OQU91611 | Sorghum | nucleus, plastid | 26.49 | 31.22 |
| KXG33962 | Sorghum | nucleus | 26.65 | 31.02 |
| OQU81938 | Sorghum | mitochondrion | 25.09 | 29.07 |
| KXG21693 | Sorghum | plastid | 6.53 | 28.51 |
| KXG38096 | Sorghum | plastid | 10.63 | 26.35 |
Protein Annotations
| Gene3D:1.10.1520.10 | MapMan:16.10.2.1.1 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 | Gene3D:3.30.160.380 | UniProt:A0A1B6QQZ1 |
| InterPro:DEAD/DEAH_box_helicase_dom | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004525 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0006412 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016075 | GO:GO:0016787 |
| GO:GO:0016891 | GO:GO:0019538 | GO:GO:0031047 | GO:GO:0035196 | GO:GO:0040029 | GO:GO:0090501 |
| GO:GO:0090502 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 | InterPro:IPR003100 |
| InterPro:IPR005034 | InterPro:IPR014001 | InterPro:IPR014720 | InterPro:IPR036389 | InterPro:IPR038248 | EnsemblPlants:KXG40313 |
| ProteinID:KXG40313 | ProteinID:KXG40313.1 | ProteinID:KXG40314.1 | HAMAP:MF_00104 | InterPro:P-loop_NTPase | InterPro:PAZ_dom |
| InterPro:PAZ_dom_sf | PFAM:PF00035 | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF00636 | PFAM:PF02170 |
| PFAM:PF03368 | PFAM:PF14709 | ScanProsite:PS00517 | PFscan:PS50137 | PFscan:PS50142 | PFscan:PS50821 |
| PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51327 | PANTHER:PTHR14950 | PANTHER:PTHR14950:SF44 | InterPro:RNase_III |
| InterPro:RNase_III_dom | InterPro:RNase_III_sf | SMART:SM00358 | SMART:SM00487 | SMART:SM00490 | SMART:SM00535 |
| SMART:SM00949 | EnsemblPlantsGene:SORBI_3001G527800 | SUPFAM:SSF101690 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | SUPFAM:SSF69065 |
| UniParc:UPI00081AE438 | InterPro:dsRBD_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:79178713..79190633
Molecular Weight (calculated)
215284.0 Da
IEP (calculated)
6.581
GRAVY (calculated)
-0.383
Length
1929 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGAPGGGDA GGEHAAASYW YDACEDGASL LCGIDFAASA DFDPGLIPAM DCGADDGFVA EIDRILESIN AEVAPAPLPP PPVPAPAPAP ALVAPLQPQP
0101: QLQEAAATVA HNAVVVADVP QRAQAVEARK EPRRESPVTA ANGGGECRDG KRQRLTAGGT VGPRHDWRRR PMPPPPPSRG WEDRRGRRDY DRSRKRDRDR
0201: DGHYGHDHHR RDARGFWERD RGGKMVFRHG MWESETDRHG KRARTQDGSP AAENKAEVDR TGNEKPVTEE KARQYQLEVL EQAKSRNTIA FLETGAGKTL
0301: IAVLLIKSIC DKMLKENKKM LAVFLVPKVP LVYQQAEVIR DRTGYRVGHY CGEMGQDFWD SRKWQREFES KQVLVMTAQI LLNILRHSII KMDAIHLLIL
0401: DECHHAVKKH PYSLVMSEFY HTTPKDKRPA VFGMTASPVN LKGVTSQEDC AIKIRNLESK LDCVVCTIKD RKELEKHVPM PLEVIVHYDK AATLLSFHEQ
0501: IKQMEAAVEE AALSSSKRTK WQFMGARDAG SRDELRLVYG VSERTESDGA ANLIQKLRAI NYALGELGQW CAYKVAQSFL TALQNDERAN YQVDVKFQES
0601: YLKKVVDLLH CQLTEGAAMK SDSNDVETHN SENPKPNELE EGELPDSHAV SVGEHVDEVI GAAVADGKVT PRVQALIKIL LKYQHTEDFR AIIFVERVVT
0701: ALVLPKVFAE LPSLGFIRCA SLIGHNNNQE MRSCQMQDTI AKFRDGRVTL LVATSVAEEG LDIRQCNVVI RFDLAKTVLA YIQSRGRARK PGSDYILMLE
0801: RGNLSHEAFL RNARNSEETL RKEAIERTDL SHLDGTSMLS PVDTSPDSMY QVESTGAVVS LNSAVGLIHF YCSQLPSDRY SILRPEFIMQ KHEKPGGSTE
0901: YSCKLQLPCN APFEKLEGPI CSSIRLAQQA VCLAACKKLH EMGAFTDMLL PDRGSGEGEK TEQNDEGDPL PGTARHREFF PEGVAEILRG EWILSGRDGY
1001: QTSQFIKLYL YSVNCVNIGT SKDPFVTQLS NFALVFGNEL DAEVLSTTMD LFVARTIITK ASLVFRGPIE ITESQLILLK SFHVRLMSIV LDVDVDPSTT
1101: PWDPAKAYLF VPVGAEKCMD LLREIDWTLV NSIVNSDAWN NPLQRARPDV YLGTNERTLG GDRREYGFGK LRNGTAFGQK AHPTYGIRGA IAEFDVVKAS
1201: GLVPGRGRGH FNDYQNQGKL FMADSCWDAK DLAGMVVTAA HSGKRFYVDS ICDNMNAENS FPRKEGYLGP LEYSSFADYY KQKYGVELIY KKQPLIRARG
1301: VSYCKNLLSP RFEHSEAGNG EFSENLDKTY YVYLPPELCL VHPLPGSLVR GAQRLPSIMR RVESMLLAIQ LKDIIGYPVP ANKILEALTA ASCQETFCYE
1401: RAELLGDAYL KWVVSRFLFL KYPQKHEGQL TRMRQQMVSN MILYQYALDK NLQSYIQADR FAPSRWAAPG VLPVFDEETR DSEPSIFDEE FAPSRELEKS
1501: SYDDYEEDSM QEDGEIEGDS SCYRVLSSKT LADVVEALIG VYYVAGGKIA ANHLMKWIGI NAELDPQEIP SSKPYNIPES IMKSINFDTL EGALGIKFQN
1601: KGLLVEAITH ASRPSSGVSC YQRLEFVGDA VLDHLITKHL FFTYTDLPPG RLTDLRAAAV NNENFARVAV KHKLHVHLRH GSSALETQIR EFVKDVQVEL
1701: LKPGFNSFGL GDCKAPKVLG DIFESIAGAI FLDSGCDTSV VWKVFQPLLD PMVTPDTLPM HPVRELQERC QQQAEGLEYK ASRTGNVATV EVFVDGIQIG
1801: VAQNPQKKMA QKLAARNALV VLKEKETAAK KDTEKDGEKK NGSQFTRQTL NDICLRRQWP MPQYRCINEG GPAHAKRFVY AVRVNTSDRG WTDECIGEPM
1901: PSVKKAKDSA AVLLLELLNR NYCDKPDGK
0101: QLQEAAATVA HNAVVVADVP QRAQAVEARK EPRRESPVTA ANGGGECRDG KRQRLTAGGT VGPRHDWRRR PMPPPPPSRG WEDRRGRRDY DRSRKRDRDR
0201: DGHYGHDHHR RDARGFWERD RGGKMVFRHG MWESETDRHG KRARTQDGSP AAENKAEVDR TGNEKPVTEE KARQYQLEVL EQAKSRNTIA FLETGAGKTL
0301: IAVLLIKSIC DKMLKENKKM LAVFLVPKVP LVYQQAEVIR DRTGYRVGHY CGEMGQDFWD SRKWQREFES KQVLVMTAQI LLNILRHSII KMDAIHLLIL
0401: DECHHAVKKH PYSLVMSEFY HTTPKDKRPA VFGMTASPVN LKGVTSQEDC AIKIRNLESK LDCVVCTIKD RKELEKHVPM PLEVIVHYDK AATLLSFHEQ
0501: IKQMEAAVEE AALSSSKRTK WQFMGARDAG SRDELRLVYG VSERTESDGA ANLIQKLRAI NYALGELGQW CAYKVAQSFL TALQNDERAN YQVDVKFQES
0601: YLKKVVDLLH CQLTEGAAMK SDSNDVETHN SENPKPNELE EGELPDSHAV SVGEHVDEVI GAAVADGKVT PRVQALIKIL LKYQHTEDFR AIIFVERVVT
0701: ALVLPKVFAE LPSLGFIRCA SLIGHNNNQE MRSCQMQDTI AKFRDGRVTL LVATSVAEEG LDIRQCNVVI RFDLAKTVLA YIQSRGRARK PGSDYILMLE
0801: RGNLSHEAFL RNARNSEETL RKEAIERTDL SHLDGTSMLS PVDTSPDSMY QVESTGAVVS LNSAVGLIHF YCSQLPSDRY SILRPEFIMQ KHEKPGGSTE
0901: YSCKLQLPCN APFEKLEGPI CSSIRLAQQA VCLAACKKLH EMGAFTDMLL PDRGSGEGEK TEQNDEGDPL PGTARHREFF PEGVAEILRG EWILSGRDGY
1001: QTSQFIKLYL YSVNCVNIGT SKDPFVTQLS NFALVFGNEL DAEVLSTTMD LFVARTIITK ASLVFRGPIE ITESQLILLK SFHVRLMSIV LDVDVDPSTT
1101: PWDPAKAYLF VPVGAEKCMD LLREIDWTLV NSIVNSDAWN NPLQRARPDV YLGTNERTLG GDRREYGFGK LRNGTAFGQK AHPTYGIRGA IAEFDVVKAS
1201: GLVPGRGRGH FNDYQNQGKL FMADSCWDAK DLAGMVVTAA HSGKRFYVDS ICDNMNAENS FPRKEGYLGP LEYSSFADYY KQKYGVELIY KKQPLIRARG
1301: VSYCKNLLSP RFEHSEAGNG EFSENLDKTY YVYLPPELCL VHPLPGSLVR GAQRLPSIMR RVESMLLAIQ LKDIIGYPVP ANKILEALTA ASCQETFCYE
1401: RAELLGDAYL KWVVSRFLFL KYPQKHEGQL TRMRQQMVSN MILYQYALDK NLQSYIQADR FAPSRWAAPG VLPVFDEETR DSEPSIFDEE FAPSRELEKS
1501: SYDDYEEDSM QEDGEIEGDS SCYRVLSSKT LADVVEALIG VYYVAGGKIA ANHLMKWIGI NAELDPQEIP SSKPYNIPES IMKSINFDTL EGALGIKFQN
1601: KGLLVEAITH ASRPSSGVSC YQRLEFVGDA VLDHLITKHL FFTYTDLPPG RLTDLRAAAV NNENFARVAV KHKLHVHLRH GSSALETQIR EFVKDVQVEL
1701: LKPGFNSFGL GDCKAPKVLG DIFESIAGAI FLDSGCDTSV VWKVFQPLLD PMVTPDTLPM HPVRELQERC QQQAEGLEYK ASRTGNVATV EVFVDGIQIG
1801: VAQNPQKKMA QKLAARNALV VLKEKETAAK KDTEKDGEKK NGSQFTRQTL NDICLRRQWP MPQYRCINEG GPAHAKRFVY AVRVNTSDRG WTDECIGEPM
1901: PSVKKAKDSA AVLLLELLNR NYCDKPDGK
0001: MVMEDEPREA TIKPSYWLDA CEDISCDLID DLVSEFDPSS VAVNESTDEN GVINDFFGGI DHILDSIKNG GGLPNNGVSD TNSQINEVTV TPQVIAKETV
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
Arabidopsis Description
DCL1Dicer-like 1 [Source:UniProtKB/TrEMBL;Acc:F4HQG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.