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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plastid 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG40313 Sorghum cytosol, nucleus, plastid 96.22 96.32
Os03t0121800-01 Rice cytosol, nucleus, plasma membrane 86.69 88.9
TraesCS5A01G516000.1 Wheat cytosol, nucleus, plastid 86.22 84.43
TraesCS4B01G347300.1 Wheat cytosol, nucleus, plastid 86.22 84.05
HORVU4Hr1G084890.7 Barley cytosol, nucleus, plastid 86.38 83.53
TraesCS4D01G342300.1 Wheat mitochondrion 86.12 82.16
GSMUA_Achr8P12350_001 Banana nucleus 71.21 75.63
KRG97266 Soybean cytosol, nucleus, plastid 73.85 73.32
KRH68982 Soybean cytosol, nucleus, plastid 73.59 72.98
VIT_15s0048g02380.t01 Wine grape cytosol, nucleus, plastid 73.38 72.74
Bra033293.1-P Field mustard cytosol, nucleus, plastid 68.77 71.94
CDX90002 Canola nucleus 67.37 71.8
CDY15207 Canola nucleus 67.22 71.75
AT1G01040.2 Thale cress nucleus 70.33 71.1
Solyc10g005130.2.1 Tomato nucleus 68.88 70.44
PGSC0003DMT400029301 Potato nucleus 69.76 70.38
Zm00001d009879_P002 Maize plastid 6.63 34.04
Zm00001d032362_P002 Maize mitochondrion 5.44 31.91
Zm00001d032655_P006 Maize nucleus 25.58 31.46
Zm00001d013796_P005 Maize cytosol, endoplasmic reticulum, nucleus 23.3 30.72
Zm00001d042432_P007 Maize cytosol 26.2 30.34
Zm00001d025830_P011 Maize cytosol, nucleus, plasma membrane 24.91 29.89
Zm00001d013797_P006 Maize nucleus 10.1 26.53
Protein Annotations
Gene3D:1.10.1520.10MapMan:16.10.2.1.1Gene3D:2.170.260.10Gene3D:3.30.160.20Gene3D:3.30.160.380UniProt:A0A0K1H3C4
InterPro:DEAD/DEAH_box_helicase_domInterPro:Dicer_dimer_sfInterPro:Dicer_dimerisation_domGO:GO:0000166GO:GO:0003674GO:GO:0003676
GO:GO:0003723GO:GO:0003824GO:GO:0004518GO:GO:0004525GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0006139GO:GO:0006396GO:GO:0006412GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987GO:GO:0016075GO:GO:0016787
GO:GO:0016891GO:GO:0019538GO:GO:0031047GO:GO:0035196GO:GO:0040029GO:GO:0090501
GO:GO:0090502InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR000999InterPro:IPR001650InterPro:IPR003100
InterPro:IPR005034InterPro:IPR014001InterPro:IPR014720InterPro:IPR036389InterPro:IPR038248EMBL:KR230388
HAMAP:MF_00104ProteinID:ONL93082.1ProteinID:ONL93085.1ProteinID:ONL93095.1ProteinID:ONL93097.1ProteinID:ONL93100.1
ProteinID:ONL93101.1InterPro:P-loop_NTPaseInterPro:PAZ_domInterPro:PAZ_dom_sfPFAM:PF00035PFAM:PF00270
PFAM:PF00271PFAM:PF00636PFAM:PF02170PFAM:PF03368PFAM:PF14709ScanProsite:PS00517
PFscan:PS50137PFscan:PS50142PFscan:PS50821PFscan:PS51192PFscan:PS51194PFscan:PS51327
PANTHER:PTHR14950PANTHER:PTHR14950:SF44InterPro:RNase_IIIInterPro:RNase_III_domInterPro:RNase_III_sfSMART:SM00358
SMART:SM00487SMART:SM00490SMART:SM00535SMART:SM00949SUPFAM:SSF101690SUPFAM:SSF52540
SUPFAM:SSF54768SUPFAM:SSF69065UniParc:UPI0006A300E5EnsemblPlantsGene:Zm00001d027412EnsemblPlants:Zm00001d027412_P004EnsemblPlants:Zm00001d027412_T004
InterPro:dsRBD_domSEG:seg::::
Description
dicer-like 101 dicer-like 101
Coordinates
chr1:-:4724456..4736832
Molecular Weight (calculated)
215275.0 Da
IEP (calculated)
6.729
GRAVY (calculated)
-0.381
Length
1931 amino acids
Sequence
(BLAST)
0001: MAGGPGGGGD AGGEHAAAAY WYDACEDSAS LLCGIDFAAS ADFDPGLIPA MDCGADDGFV AEIDRILESI NAEATPAPPP PPPAPAPAPA PAPVAPLQPQ
0101: PQLQEAAATV AHNAVAVSDV AQRAPAVEAR KEPRREFPVA AANGGDDCRD SKRQRLPAGG TGGPRHDWRR RPMAPPPPSR GWEDRGRGRR EYDRPRKRDR
0201: DGHYGQCHDH HRRDPRGFWE RDRGGKMVFR HGMWEAEADR QGKRARTKDG CPPAENKAEV DRSGKEKPAT EEKARQYQLE VLEQAKSRNT IAFLETGAGK
0301: TLIAVLLIKS ICDKMLKENK KILAVFLVPK VPLVYQQAEV IRERTGYRVG HYCGEMGQDF WDSRKWQREF ESKQVLVMTA QILLNILRHS IIKMDAIHLL
0401: ILDECHHAVK KHPYSLVMSE FYHTTPKDKR PSVFGMTASP VNLKGVTSQE DCAIKIRNLE SKLDCIVCTI KDRKELEKHV PMPLEVIVHY DKAATLLSFH
0501: EQIKQMEAAV EEAALSSSKR TKWQFMGARD AGSRDELRLV YGVSERTESD GAANLIQKLR AINYALGELG QWCAYKVALS FLTALQNDER ANYQVDVKFQ
0601: ESYLRKVVDL LHCQLTEGAA MKSDSNDVEM HNSENPKPNE LEEGELPDSH AVSVGEHVDE VIGAAVADGK VTPRVQALIK ILLKYQHTED FRAIIFVERV
0701: VTALVLPKVF AELPSLGFIR CASLIGHNNN QEMRSCQMQD TITKFRDGRV TLLVATSVAE EGLDIRQCNV VIRFDLAKTV LAYIQSRGRA RKPGSDYILM
0801: LERGNMSHEA FLRNARNSEE TLRKEAIERT DLSHLDGTSM LSPVDISPDS MYQVESTGAV VSLNSAVGLV HFYCSQLPSD RYSILRPEFI MQKHEKPGGS
0901: TEYSCKLQLP CNAPFEKLEG PICSSIRLAQ QAVCLAACKK LHEMGAFTDM LLPDRGSGEG EKTEQNDEGD PLPGTARHRE FFPEGVAEIL HGEWILSGRD
1001: GYQSSQFIKL YLYSVNCVNI GTSKDPFVTQ LSNFALIFGN ELDAEVLSTT MDLFVARTII TKASLVFRGP IEITESQLIL LKSFHVRLMS IVLDVDVDPS
1101: TTPWDPAKAY LFVPVGAEKC MDLLREIDWT LVNSIVNSDA WNNPLQRARP DVYLGTNERT LGGDRREYGF GKLRHGTAFG QKAHPTYGIR GAIAEFDVVK
1201: ASGLVPGRGW GHFNDYQNKG KLFMADSCWD AKDLAGMVVT AAHSGKRFYV DSICYNMNAE NSFPRKEGYL GPLEYSSFAD YYKQKYGVEL VYKKQPLIRA
1301: RGVSYCKNLL SPRFEHSEAS NGEFSENLDK TYYVYLPPEL CLVHPLPGSL VRGAQRLPSI MRRVESMLLA IQLKDIIGYP VPANKILEAL TAASCQETFC
1401: YERAELLGDA YLKWVVSRFL FLKYPQKHEG QLTRMRQQMV SNMILYQYAL NKNLQSYIQA DRFAPSRWAA PGVLPVFDEE TRDSEPSIFD EEFTPSSELQ
1501: KNLYDDYDGD SMQEDGEIEG DSSCYRVLSS KTLADVVEAL IGVYYVAGGK IATNHLMKWI GINAELDPQE IPSSKPYNIP ESIIKSINFD TLEGALGIKF
1601: QNKGLLVEAI THASRPSSGV SCYQRLEFVG DAVLDHLITK HLFFTYTDLP PGRLTDLRAA AVNNENFARV AVKHKLHVHL RHGSSALETQ IREFVKDVQE
1701: ELSKPGFNSF GLGDCKAPKV LGDIFESIAG AIFLDSGCAT SVVWKVFQPL LDPMVTPDTL PMHPVRELQE RCQQQAEGLE YKASRTGNVA TVEVLVDGIQ
1801: IGVAQNPQKK MAQKLAARNA LVVLKEKETA AKKDTEKDGE KKNGSQFTRQ TLNDICLRRQ WPMPQYRCIN EGGPAHAKRF VYAVRVNTSD SGWTDECIGE
1901: PMPSVKKAKD SAAVLLLELL NRNYRGKPDG K
Best Arabidopsis Sequence Match ( AT1G01040.1 )
(BLAST)
0001: MVMEDEPREA TIKPSYWLDA CEDISCDLID DLVSEFDPSS VAVNESTDEN GVINDFFGGI DHILDSIKNG GGLPNNGVSD TNSQINEVTV TPQVIAKETV
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
Arabidopsis Description
DCL1Dicer-like 1 [Source:UniProtKB/TrEMBL;Acc:F4HQG6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.