Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG40313 | Sorghum | cytosol, nucleus, plastid | 76.35 | 71.95 |
| Os03t0121800-01 | Rice | cytosol, nucleus, plasma membrane | 74.31 | 71.75 |
| Zm00001d027412_P004 | Maize | cytosol, nucleus, plastid | 75.63 | 71.21 |
| KRG97266 | Soybean | cytosol, nucleus, plastid | 74.64 | 69.77 |
| VIT_15s0048g02380.t01 | Wine grape | cytosol, nucleus, plastid | 74.7 | 69.71 |
| KRH68982 | Soybean | cytosol, nucleus, plastid | 74.2 | 69.29 |
| TraesCS5A01G516000.1 | Wheat | cytosol, nucleus, plastid | 75.03 | 69.17 |
| TraesCS4B01G347300.1 | Wheat | cytosol, nucleus, plastid | 74.64 | 68.5 |
| HORVU4Hr1G084890.7 | Barley | cytosol, nucleus, plastid | 74.42 | 67.75 |
| TraesCS4D01G342300.1 | Wheat | mitochondrion | 74.86 | 67.24 |
| Bra033293.1-P | Field mustard | cytosol, nucleus, plastid | 68.1 | 67.06 |
| CDX90002 | Canola | nucleus | 66.78 | 67.0 |
| CDY15207 | Canola | nucleus | 66.5 | 66.83 |
| Solyc10g005130.2.1 | Tomato | nucleus | 69.03 | 66.47 |
| PGSC0003DMT400029301 | Potato | nucleus | 69.86 | 66.35 |
| AT1G01040.2 | Thale cress | nucleus | 69.42 | 66.07 |
| GSMUA_Achr7P11130_001 | Banana | cytosol, nucleus, plastid | 7.26 | 38.71 |
| GSMUA_Achr10P... | Banana | extracellular | 3.69 | 35.83 |
| GSMUA_Achr2P15170_001 | Banana | cytosol | 6.6 | 35.29 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, nucleus, plastid | 2.7 | 34.03 |
| GSMUA_Achr7P11120_001 | Banana | cytosol, nucleus, plastid | 7.54 | 33.66 |
| GSMUA_Achr10P... | Banana | nucleus | 12.27 | 33.63 |
| GSMUA_Achr9P22470_001 | Banana | cytosol | 6.88 | 32.72 |
| GSMUA_Achr10P... | Banana | cytosol | 7.15 | 30.73 |
| GSMUA_Achr5P10880_001 | Banana | cytosol | 25.47 | 28.97 |
| GSMUA_Achr9P22460_001 | Banana | cytosol, golgi, nucleus | 20.35 | 27.15 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 10.23 | 16.65 |
Protein Annotations
Description
Endoribonuclease Dicer homolog 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G12350_001]
Coordinates
chr8:+:9122581..9136638
Molecular Weight (calculated)
205578.0 Da
IEP (calculated)
6.700
GRAVY (calculated)
-0.354
Length
1818 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGGEPTLPGP AGAAAALANG GGDPASYWFD ACEDDGLCGI DFADFDPSAL PSLDHVDEDG FLGEIDRILD SINGDHNAAP LPPPNGFGGD EAKERRETVD
0101: EKVAERDGSV ANGGWRYNSR KDRVCERADD RAYRRDRYRE SPGRRRSRHW DEVDRRRRDG EWGRKRERDA GGEWRESRDR EWRERESRGY WERDKSGKVV
0201: FRVGSWEAET NREAKKAKLD ITDQVRSPEK RPQEKREKST EEQARQYQLD VLEQAKKKNT IAFLETGAGK TLIAVMLIQS VCTEMLKHNK KMLAVFLVPK
0301: VPLVYQQAEV IRERTGYKVG HYCGETGQDF WDARRWQLVP LQVLVMTAQI LLNILRHSII KMESIHLLIL DECHHAVKKH PYSLVMSEFY HTTPKDKRPA
0401: VFGMTASPVN LKGMVQEDCA IKIRNLESKL DSIVCTVKDR RELEKHVPMP LEIVVQYDKA AVLWSLHEQI KQMEVEVEQA AHSSSRKSKW QTESDGAANL
0501: IQKLRAINYA LGELGQWCAY KVAHSFLTAL QNDERANYQL DVKFQESYLK KVVALLQCQL SEGAVNDGGK NGADVHSFDA QSVEEIEEGE LPNSHAFIWS
0601: SVMFHLLYDV KSLFSVMKVH LFYATASIFQ VHLVEFGKSL SVSGGEHVDV IIGAAVADGK VTPKVQALIK ILLKYQHTED FHAIIFVERV VAALVLPKVF
0701: SELPSLSFIK CASLIGHNNN QEMRTSQMQD TIAQFRDGRI TLLVATSVAE EGLDIRQCNV VIRFDLAKTV LAYIQSRGRA RKPGSDYILM LERGNLSHET
0801: FLRNARNSEE TLRKEAIERT DLSHLKDIQR LSTTDTLPGS VYQVQSTGAI VSLNSAVGLI HFYCSQLPSD RYSILRPEFI MQRHERPGGS TEYSCKLQLP
0901: CNAPFQQLEG PLCCSMRIAQ QAVCLAACKK LHEMGAFTDM LLPDKGSGEE GEKVEQNDEG DPLPGTARHR EFYPEGVASI LRGEWILSGS EGCNSSEFHE
1001: LHMYAVNCVN VGTSKDPFLT QVSCFAILFG NELDAEVLSM TMDLFVARTM ITKASLVFRG TIMITETQLV SLKSFHVRLM SIVLDIDVDP LTTPWDPAKA
1101: YLFIPVVAEK CHDPLKQIDW CLVEKIVETD AWNNPLQRAH FIYHCEGKLF LADSWIDVKD LVGRIVTAAH SGKRFYVDSV RYDMNAENSF PRKEGYLGPL
1201: EYSSYADYYR QKYGVDLMYK RQPLIRGRGV SYCKNLLSPR FEHSEEVENE ENLDKTYYVY LPPELCLIHP LPGALVRGAQ RLPSIMRRVE SMLLAVQLKD
1301: MIRYPVPATK ILEALTAASC QETFCYERAE LLGDAYLKWV VSIFLFLKYP QKHEGQLTRM RQQMVSNMVL YQYALNKGLQ SYIQADRFAP SRWAAPENMR
1401: EDGEVESDSS CYRVLSSKTL ADVVEALIGV YYVEGGEVAA NHLMKWIGIQ VDIDPRDIPC PKPYNIPESI MRSVDFDALE GALNVKFRDR GLLVEAITHA
1501: SRPSSGVSCY QRLEFVGDAV LDHLITKHLF FTYTDLPPGR LTDLRAAAVN NENFARVAVK HKLHVHLRHG SSALEAQIRD FVKDVQDELS RTGFNYFGLG
1601: DCKAPKVLGD IVESIAGAIF LDNEHDASIV WKVFQPLLHP MVTPETLPMH PVRELQERCQ QQAEGLEYKA TRTGNIATVE VFIDGVQIGI AQNPQKKMAQ
1701: KLAARNALVV LKEKEKENAI AKDMDKNGER KNGIQIFTRQ TLNDICLRRQ WPMPQYRCVN EGGPAHAKRF VYAVRVNTSD RGWTDECIGE PMPSVKKAKD
1801: SAATLLLELL SRCYPDNK
0101: EKVAERDGSV ANGGWRYNSR KDRVCERADD RAYRRDRYRE SPGRRRSRHW DEVDRRRRDG EWGRKRERDA GGEWRESRDR EWRERESRGY WERDKSGKVV
0201: FRVGSWEAET NREAKKAKLD ITDQVRSPEK RPQEKREKST EEQARQYQLD VLEQAKKKNT IAFLETGAGK TLIAVMLIQS VCTEMLKHNK KMLAVFLVPK
0301: VPLVYQQAEV IRERTGYKVG HYCGETGQDF WDARRWQLVP LQVLVMTAQI LLNILRHSII KMESIHLLIL DECHHAVKKH PYSLVMSEFY HTTPKDKRPA
0401: VFGMTASPVN LKGMVQEDCA IKIRNLESKL DSIVCTVKDR RELEKHVPMP LEIVVQYDKA AVLWSLHEQI KQMEVEVEQA AHSSSRKSKW QTESDGAANL
0501: IQKLRAINYA LGELGQWCAY KVAHSFLTAL QNDERANYQL DVKFQESYLK KVVALLQCQL SEGAVNDGGK NGADVHSFDA QSVEEIEEGE LPNSHAFIWS
0601: SVMFHLLYDV KSLFSVMKVH LFYATASIFQ VHLVEFGKSL SVSGGEHVDV IIGAAVADGK VTPKVQALIK ILLKYQHTED FHAIIFVERV VAALVLPKVF
0701: SELPSLSFIK CASLIGHNNN QEMRTSQMQD TIAQFRDGRI TLLVATSVAE EGLDIRQCNV VIRFDLAKTV LAYIQSRGRA RKPGSDYILM LERGNLSHET
0801: FLRNARNSEE TLRKEAIERT DLSHLKDIQR LSTTDTLPGS VYQVQSTGAI VSLNSAVGLI HFYCSQLPSD RYSILRPEFI MQRHERPGGS TEYSCKLQLP
0901: CNAPFQQLEG PLCCSMRIAQ QAVCLAACKK LHEMGAFTDM LLPDKGSGEE GEKVEQNDEG DPLPGTARHR EFYPEGVASI LRGEWILSGS EGCNSSEFHE
1001: LHMYAVNCVN VGTSKDPFLT QVSCFAILFG NELDAEVLSM TMDLFVARTM ITKASLVFRG TIMITETQLV SLKSFHVRLM SIVLDIDVDP LTTPWDPAKA
1101: YLFIPVVAEK CHDPLKQIDW CLVEKIVETD AWNNPLQRAH FIYHCEGKLF LADSWIDVKD LVGRIVTAAH SGKRFYVDSV RYDMNAENSF PRKEGYLGPL
1201: EYSSYADYYR QKYGVDLMYK RQPLIRGRGV SYCKNLLSPR FEHSEEVENE ENLDKTYYVY LPPELCLIHP LPGALVRGAQ RLPSIMRRVE SMLLAVQLKD
1301: MIRYPVPATK ILEALTAASC QETFCYERAE LLGDAYLKWV VSIFLFLKYP QKHEGQLTRM RQQMVSNMVL YQYALNKGLQ SYIQADRFAP SRWAAPENMR
1401: EDGEVESDSS CYRVLSSKTL ADVVEALIGV YYVEGGEVAA NHLMKWIGIQ VDIDPRDIPC PKPYNIPESI MRSVDFDALE GALNVKFRDR GLLVEAITHA
1501: SRPSSGVSCY QRLEFVGDAV LDHLITKHLF FTYTDLPPGR LTDLRAAAVN NENFARVAVK HKLHVHLRHG SSALEAQIRD FVKDVQDELS RTGFNYFGLG
1601: DCKAPKVLGD IVESIAGAIF LDNEHDASIV WKVFQPLLHP MVTPETLPMH PVRELQERCQ QQAEGLEYKA TRTGNIATVE VFIDGVQIGI AQNPQKKMAQ
1701: KLAARNALVV LKEKEKENAI AKDMDKNGER KNGIQIFTRQ TLNDICLRRQ WPMPQYRCVN EGGPAHAKRF VYAVRVNTSD RGWTDECIGE PMPSVKKAKD
1801: SAATLLLELL SRCYPDNK
0001: MVMEDEPREA TIKPSYWLDA CEDISCDLID DLVSEFDPSS VAVNESTDEN GVINDFFGGI DHILDSIKNG GGLPNNGVSD TNSQINEVTV TPQVIAKETV
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
Arabidopsis Description
DCL1Dicer-like 1 [Source:UniProtKB/TrEMBL;Acc:F4HQG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.