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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 3
  • plastid 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G516000.1 Wheat cytosol, nucleus, plastid 95.01 97.52
TraesCS4B01G347300.1 Wheat cytosol, nucleus, plastid 94.96 97.02
HORVU4Hr1G084890.7 Barley cytosol, nucleus, plastid 92.64 93.89
Os03t0121800-01 Rice cytosol, nucleus, plasma membrane 81.18 87.25
KXG40313 Sorghum cytosol, nucleus, plastid 82.36 86.42
Zm00001d027412_P004 Maize cytosol, nucleus, plastid 82.16 86.12
GSMUA_Achr8P12350_001 Banana nucleus 67.24 74.86
KRG97266 Soybean cytosol, nucleus, plastid 69.22 72.03
KRH68982 Soybean cytosol, nucleus, plastid 68.73 71.44
VIT_15s0048g02380.t01 Wine grape cytosol, nucleus, plastid 68.63 71.3
Bra033293.1-P Field mustard cytosol, nucleus, plastid 64.43 70.64
CDY15207 Canola nucleus 63.04 70.54
CDX90002 Canola nucleus 63.04 70.42
AT1G01040.2 Thale cress nucleus 66.16 70.1
PGSC0003DMT400029301 Potato nucleus 65.46 69.23
Solyc10g005130.2.1 Tomato nucleus 64.58 69.23
TraesCS7D01G344100.1 Wheat cytosol 5.34 34.95
TraesCS7D01G344200.1 Wheat cytosol 5.24 33.87
TraesCS7D01G504300.3 Wheat mitochondrion 6.03 32.97
TraesCS7D01G502800.1 Wheat mitochondrion, nucleus 5.98 32.88
TraesCS7D01G398600.2 Wheat mitochondrion, nucleus 5.98 32.53
TraesCS5D01G086900.1 Wheat cytosol 21.99 31.76
TraesCS1D01G158000.2 Wheat nucleus 25.4 31.57
TraesCS3D01G411200.6 Wheat nucleus 24.51 30.36
TraesCS2D01G479300.1 Wheat plastid 4.99 29.19
TraesCS2D01G362700.1 Wheat nucleus 23.02 28.68
Protein Annotations
Gene3D:1.10.1520.10MapMan:16.10.2.1.1Gene3D:2.170.260.10Gene3D:3.30.160.20Gene3D:3.30.160.380ncoils:Coil
InterPro:Dicer_dimer_sfInterPro:Dicer_dimerisation_domGO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003723GO:GO:0003824GO:GO:0004518GO:GO:0004525GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0006139GO:GO:0006396GO:GO:0006412GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987GO:GO:0016075GO:GO:0016787
GO:GO:0016891GO:GO:0019538GO:GO:0035196GO:GO:0040029InterPro:Helicase/UvrB_NInterPro:Helicase_ATP-bd
InterPro:Helicase_CInterPro:IPR000999InterPro:IPR001650InterPro:IPR003100InterPro:IPR005034InterPro:IPR014001
InterPro:IPR014720InterPro:IPR036389InterPro:IPR038248HAMAP:MF_00104InterPro:P-loop_NTPaseInterPro:PAZ_dom
InterPro:PAZ_dom_sfPFAM:PF00271PFAM:PF00636PFAM:PF02170PFAM:PF03368PFAM:PF04851
PFAM:PF14709ScanProsite:PS00517PFscan:PS50137PFscan:PS50142PFscan:PS50821PFscan:PS51192
PFscan:PS51194PFscan:PS51327PANTHER:PTHR14950PANTHER:PTHR14950:SF44InterPro:RNase_IIIInterPro:RNase_III_dom
InterPro:RNase_III_sfSMART:SM00358SMART:SM00487SMART:SM00490SMART:SM00535SMART:SM00949
SUPFAM:SSF101690SUPFAM:SSF52540SUPFAM:SSF54768SUPFAM:SSF69065EnsemblPlantsGene:TraesCS4D01G342300EnsemblPlants:TraesCS4D01G342300.1
TIGR:cd00046TIGR:cd00048TIGR:cd00079TIGR:cd00593TIGR:cd02844InterPro:dsRBD_dom
SEG:seg:::::
Description
No Description!
Coordinates
chr4D:+:498886710..498898940
Molecular Weight (calculated)
225541.0 Da
IEP (calculated)
6.600
GRAVY (calculated)
-0.419
Length
2024 amino acids
Sequence
(BLAST)
0001: MPLSGRRKYH CSSVSHSLEP PLSARERRAR EGQAGKASTH LLYRAQTGGI NRAAAAGEMA GGGGGEQPGA VSYWYDACED EDDPSLLFDF AASADFGPAM
0101: DSGGIDFAPG LMPLPAMDCG IDFASADFDP GLLPAMDCGV EDGLVDEIDR ILESINDESA PAPAPQPPPS QPVPPPPPAE RVQEAAAAAV VDNAVAVVGS
0201: GQRSEAVEPR RETRIVEPRK ETRSVDPRRE TRRESHGGST NGGRSGEWRD GKRPRLAPGA HGEPRPDSRR RPMLPPPSRA WEERRGRRDF VDRPRKRDRD
0301: SNPAHRREAR GFWERDRGGK MVFRPGTWEQ ESEREGKRAR TQSGGSVEKN AEADKAASAQ KEKPLAEEQA RHYQLEVLEQ AKSRNTIAFL ETGAGKTLIA
0401: VLLIKSICDK MMKENRKILA VFLVPKVPLV YQQAEVIRER TGYRVGHYCG EMGQDFWDAR KWQREFDSKQ VLVMTAQILL NILRHSIIKM DAIHLLILDE
0501: CHHAVKKHPY SLVMSEFYHT TPKDKRPVVF GMTASPVNLK GVTSQEDCAI KIRNLESKLD SIVCTIKDRK ELEKHVPMPF EVVVQYDKAA TLCSLHEQIK
0601: QMEAAVEEAA LCSSKRTKWQ FMGARDAGSR DELRLVYGVS ERTESDGAAN LIQKLRAINY ALGELGQWCA YKVAQSFLTV LQNDERANYQ VDVKFQESHL
0701: KKVVDLLHCQ LTEGAAVKSE TNDVEMHNTE NHNPSELEDG ELPDSHAVSV GEHVDEVIGA AVADGKVTPR VQALIKILLK YQHTDDFRAI IFVERVVTAL
0801: VLPKVLAELP SLSFIRCASL IGHNNNQEMR TSQMQDTIAK FRDGRVTLLV ATSVAEEGLD IRQCNVVIRF DLAKTVLAYV QSRGRARKPG SDYILMVERG
0901: NLAHETFLRN ARNSEETLRK EAIERTDLSH LDGTLLNSID TSPDSMYQVE STGAVVSLNS AVGLVHFYCS QLPSDRYSIL RPEFIMQKHE KPGGSMEYSC
1001: KLQLPCNAPF EKLEGPICGS IRLAQQAVCL AACKKLHEMN AFTDMLLPDR GSGEGEKTEQ NEGDPLPGTA RHREFYPEGV AEILRGEWIL CGRDGCQSTQ
1101: FIKLYMYSVN CVDVGTSKDP SLAQLSNFSI IFGSELDAEV LSTPMDLFVA RTMITKASLV FRGPIEVTES QLVLLKGFHV RLMSIVLDVD VDPSTTPWDP
1201: AKAYLFVPVG AEKCTDALRE IDWTLVNNIV NTDAWNNPLQ KARPDVYLGT NERTLGGDKR EYGFGKLRNG TAFGQKAHPT YGIRGAIADF DIVKASGLVP
1301: SRDRGYSSDY QNQGKLFMAD SCWDAKDLSG MVVTAAHSGK RFYVDCICYN MNAENSFPRK EGYLGPLEYS SYADYYKQKY GVELVYKKQP LIRARGVSYC
1401: KNLLSPRFEH SEAREGDFSE NVDKTYYVYL PPELCLVHPL PGSLIRGAQR LPSIMRRVES MLLAVQLKET IDYPVPAVKI LEALTAASCQ ETFCYERAEL
1501: LGDAYLKWVV SRFLFLKYPQ KHEGQLTRMR QQMVSNMVLY QFALNKTLQS YIQADRFAPS RWAAPGVLPV FDEETRESEP SIFGEGSIPG NEVQKDYDDD
1601: YTHSIQEEGE IDGDSSCYRV LSSKTLADVV EALIGVYYVA GGKIAANHLM RWIGIHAELD PQEIPPPKPY NIPESILKGI DFETLEGVLG MKFQNKGFLI
1701: EAITHASRPS SGVSCYQRLE FVGDAVLDHL ITKHLFFTYT DLPPGRLTDL RAAAVNNENF ARVAVRRKLH GHLRHGSSAL EKQIREFVKD VREEISKSGF
1801: NSFGLGDCKA PKVLGDIIES IAGAVFLDSG YDTSAVWKVF QPLLEPLVTP ETLPMHPIRE LQERCQQQAE GLEYKASRAG NVATVEVFVD GVQIGVAQNP
1901: QKKMAQKLAA RNALVVLKDK ETAAKKETEK DGDKNNAGFT RQTLNDTCLR RQWPMPQYRC INEGGPAHAK RFVYAVRVNT SDCGWTDECV GEPMPSVKKA
2001: KDSAAMLLLE LLNRSFPDKP DGKK
Best Arabidopsis Sequence Match ( AT1G01040.1 )
(BLAST)
0001: MVMEDEPREA TIKPSYWLDA CEDISCDLID DLVSEFDPSS VAVNESTDEN GVINDFFGGI DHILDSIKNG GGLPNNGVSD TNSQINEVTV TPQVIAKETV
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
Arabidopsis Description
DCL1Dicer-like 1 [Source:UniProtKB/TrEMBL;Acc:F4HQG6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.