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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G344100.1 Wheat cytosol 92.33 93.53
HORVU7Hr1G082860.4 Barley plastid 88.82 77.44
EES13704 Sorghum cytosol 65.18 70.1
Os06t0358800-01 Rice cytosol 64.54 67.56
Zm00001d032362_P002 Maize mitochondrion 63.58 60.49
Bra039552.1-P Field mustard cytosol 36.74 40.64
CDY22924 Canola cytosol 36.74 40.64
Bra012789.1-P Field mustard cytosol, nucleus, peroxisome 36.74 40.49
CDY09765 Canola cytosol, nucleus, peroxisome 36.74 40.49
CDX90592 Canola cytosol, nucleus, peroxisome 36.74 40.49
VIT_12s0059g01120.t01 Wine grape cytosol 37.06 40.42
CDY48286 Canola cytosol 36.1 39.93
Solyc05g041920.2.1 Tomato cytosol 33.87 39.85
PGSC0003DMT400086351 Potato cytosol 25.24 38.92
PGSC0003DMT400053499 Potato mitochondrion 34.19 36.77
AT4G15417.2 Thale cress mitochondrion 33.87 36.68
PGSC0003DMT400001808 Potato cytosol 29.07 36.26
TraesCS2D01G479300.1 Wheat plastid 39.94 36.13
PGSC0003DMT400001805 Potato mitochondrion 33.23 35.49
Solyc07g049160.2.1 Tomato mitochondrion 32.91 35.15
Solyc07g049150.2.1 Tomato cytosol 28.43 33.21
Solyc05g024210.1.1 Tomato cytosol 32.91 30.65
TraesCS7D01G502800.1 Wheat mitochondrion, nucleus 32.27 27.45
TraesCS7D01G398600.2 Wheat mitochondrion, nucleus 32.59 27.42
TraesCS7D01G504300.3 Wheat mitochondrion 31.95 27.03
TraesCS5D01G086900.1 Wheat cytosol 31.31 7.0
TraesCS3D01G411200.6 Wheat nucleus 32.59 6.24
TraesCS1D01G158000.2 Wheat nucleus 32.27 6.2
TraesCS2D01G362700.1 Wheat nucleus 29.39 5.66
GSMUA_Achr10P... Banana extracellular 3.19 5.35
TraesCS4D01G342300.1 Wheat mitochondrion 33.87 5.24
GSMUA_Achr9P22470_001 Banana cytosol 2.24 1.83
Protein Annotations
Gene3D:1.10.1520.10Gene3D:3.30.160.20MapMan:35.1GO:GO:0003674GO:GO:0003824GO:GO:0004518
GO:GO:0004525GO:GO:0006139GO:GO:0006396GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787InterPro:IPR000999InterPro:IPR036389PFAM:PF00636ScanProsite:PS00517PFscan:PS50142
PANTHER:PTHR14950PANTHER:PTHR14950:SF35InterPro:RNase_III_domInterPro:RNase_III_sfSMART:SM00535SUPFAM:SSF54768
SUPFAM:SSF69065EnsemblPlantsGene:TraesCS7D01G344200EnsemblPlants:TraesCS7D01G344200.1TIGR:cd00593SEG:seg:
Description
No Description!
Coordinates
chr7D:+:440975803..440978068
Molecular Weight (calculated)
34633.1 Da
IEP (calculated)
4.941
GRAVY (calculated)
-0.362
Length
313 amino acids
Sequence
(BLAST)
001: MDPQSHSHSQ SHSPPPAADD DPDAMPREQQ QREEAPPGYV PPMSPEEVAA VEALLCYEFK DKSLVGLALT HGSFYLPYRS GDATYERLEY LGDAVLTCLV
101: SREVFLTYRD LPPGPLTRLR AANVDKEKLA RIAVDHGIHR FLRHKAPKLE EQIADFVKEL CQYEYHSNGL LDAPKVLSDI VESLIGAIYL DSKYNQELVW
201: QVFRKLANPL ISLESLGKHP VSELLEFGQK TGRIVDISKD GWVKDTKVDV FVDGVLVASA TYAQKKEIAS NRAAKAALDK LKEMSGQSDV LSAPGEAPEP
301: LDELGRAGAL ELQ
Best Arabidopsis Sequence Match ( AT4G15417.2 )
(BLAST)
001: MNKTQTQQKL NQRHISLSSN PPLVSMGSQL SNAIDGKDNT KTIGSADPDQ LMEIESLEKI LNYKFKDKSL LLKAFTDASY VDDKSESYEL LELLGDSILN
101: MGIIYDFIKL YPKEAPGPLT KLRAVNVDTE KLARVAVNHQ LYSYLRHKKP LLEEQILEFV EAMEKYPLHS NGLLKVPKVL ADIVESTIGA IFMDCNSTET
201: VWKVIKPLLE PIIHLDKMKS HPMTELNEMC QKRNLKLTSK DTWEENQTYC FHIEDKFVGC GHHPVKKETA RNFAAKNAID NFAKFFGDL
Arabidopsis Description
ATRTL1RNAse II-like 1 [Source:TAIR;Acc:AT4G15417]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.