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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 3
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P22470_001 Banana cytosol 28.88 14.14
GSMUA_Achr5P10880_001 Banana cytosol 43.32 5.07
GSMUA_Achr8P12350_001 Banana nucleus 35.83 3.69
TraesCS7D01G344200.1 Wheat cytosol 5.35 3.19
TraesCS2D01G479300.1 Wheat plastid 5.88 3.18
VIT_12s0059g01120.t01 Wine grape cytosol 4.81 3.14
HORVU7Hr1G082860.4 Barley plastid 5.88 3.06
TraesCS7D01G344100.1 Wheat cytosol 4.81 2.91
TraesCS7B01G248100.1 Wheat cytosol 4.81 2.91
AT4G15417.2 Thale cress mitochondrion 4.28 2.77
PGSC0003DMT400053499 Potato mitochondrion 4.28 2.75
TraesCS7A01G336500.1 Wheat cytosol 4.28 2.56
Bra039552.1-P Field mustard cytosol 3.74 2.47
CDY22924 Canola cytosol 3.74 2.47
CDY48286 Canola cytosol 3.74 2.47
Bra012789.1-P Field mustard cytosol, nucleus, peroxisome 3.74 2.46
CDX90592 Canola cytosol, nucleus, peroxisome 3.74 2.46
CDY09765 Canola cytosol, nucleus, peroxisome 3.74 2.46
GSMUA_Achr7P11120_001 Banana cytosol, nucleus, plastid 5.35 2.46
Solyc05g041920.2.1 Tomato cytosol 3.21 2.26
Zm00001d032362_P002 Maize mitochondrion 3.74 2.13
GSMUA_Achr10P... Banana cytosol, extracellular, nucleus, plastid 1.6 2.08
EES13704 Sorghum cytosol 3.21 2.06
GSMUA_Achr7P11130_001 Banana cytosol, nucleus, plastid 3.74 2.05
Solyc07g049160.2.1 Tomato mitochondrion 3.21 2.05
Os06t0358800-01 Rice cytosol 3.21 2.01
Solyc05g024210.1.1 Tomato cytosol 3.21 1.79
GSMUA_Achr2P15170_001 Banana cytosol 3.21 1.76
PGSC0003DMT400001805 Potato mitochondrion 2.67 1.71
GSMUA_Achr10P... Banana nucleus 5.88 1.66
PGSC0003DMT400001808 Potato cytosol 2.14 1.59
Solyc07g049150.2.1 Tomato cytosol 2.14 1.49
PGSC0003DMT400086351 Potato cytosol 1.07 0.99
GSMUA_Achr9P22460_001 Banana cytosol, golgi, nucleus 6.95 0.95
GSMUA_Achr10P... Banana cytosol 2.14 0.95
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 4.81 0.81
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1InterPro:DEAD/DEAH_box_helicase_domGO:GO:0000166GO:GO:0003674GO:GO:0003676
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSMUA_Achr10G28140_001
EnsemblPlants:GSMUA_Achr10P28140_001EnsemblPlants:GSMUA_Achr10T28140_001InterPro:Helicase_ATP-bdInterPro:IPR014001UniProt:M0RM38InterPro:P-loop_NTPase
PFAM:PF00270PFscan:PS51192PANTHER:PTHR14950PANTHER:PTHR14950:SF19SUPFAM:SSF52540TMHMM:TMhelix
UniParc:UPI000295518B:::::
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G28140_001]
Coordinates
chr10:-:31057809..31063574
Molecular Weight (calculated)
21807.0 Da
IEP (calculated)
7.955
GRAVY (calculated)
0.091
Length
187 amino acids
Sequence
(BLAST)
001: MMGCSCTYSN TPCSLIVFFF SFILYFDVLL WQQYETIKVH TDVDVQYCCG AKAVDARSIA SWQKEVSTYQ VMVMTPQILL DVPRKGFLNL DMVHLMVIDE
101: CHHALGNHPY NRLMKEFYHK SVLKPHIFGM TASPILRKGK FDAIDEYMYY AEAKLRTMAF GICELNWLKM IHRDLKILCC TMTTKQQ
Best Arabidopsis Sequence Match ( AT3G43920.2 )
(BLAST)
0001: MHSSLEPEKM EEGGGSNSLK RKFSEIDGDQ NLDSVSSPMM TDSNGSYELK VYEVAKNRNI IAVLGTGIDK SEITKRLIKA MGSSDTDKRL IIFLAPTVNL
0101: VKQQCCEIRA LVNLKVEEYF GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP YAKLMKEFYH ESTSKPKIFG
0201: LTASAVIRKG IVSSPSNYAA QVSELERLMD SKIFNPEERE GVEKFATTVK EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE
0301: TYQKRLSIDY REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ DDKSLVDLQQ NHLSAVISGH VSPKLKELFH
0401: LLDSFRGDKQ KQCLILVERI ITAKVIERFV KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS CMVCFDLPKT
0501: MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP
0601: PCKKLRLDNN LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC CNISGEVYSS FSLLLESTLA EDVGKVEMDL
0701: YLVRKLVKAS VSPCGQIRLS QEELVKAKYF QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS AINSCASIVE
0801: FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI
0901: VLAHPNQPLM KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY LLPSVMHRLE SLMLASQLRE EIDCSIDNFS
1001: ISSTSILEAV TTLTCPESFS MERLELLGDS VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA PGQFSLFPVP
1101: CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE
1201: LERKIQHEFS AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN NENFAQVAVK NNLHTHLQRC ATVLETQIND
1301: YLMSFQKPDE TGRSIPSIQG PKALGDVVES IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG VKAQATIQLQ
1401: LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW
1501: PMPTFDTSEE KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL ERRKIVIIQK
Arabidopsis Description
DCL3Endoribonuclease Dicer homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXW7]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.