Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G364700.2 | Wheat | cytosol | 97.54 | 97.66 |
| HORVU2Hr1G088270.9 | Barley | endoplasmic reticulum | 95.14 | 94.56 |
| TraesCS2B01G383300.2 | Wheat | plastid | 97.72 | 92.38 |
| Os04t0509300-02 | Rice | cytosol | 76.18 | 74.71 |
| Zm00001d025830_P011 | Maize | cytosol, nucleus, plasma membrane | 72.43 | 73.15 |
| OQU81938 | Sorghum | mitochondrion | 72.68 | 70.93 |
| GSMUA_Achr9P22460_001 | Banana | cytosol, golgi, nucleus | 46.22 | 55.1 |
| VIT_11s0149g00120.t01 | Wine grape | cytosol | 37.97 | 49.8 |
| KRH03544 | Soybean | nucleus | 49.35 | 49.02 |
| KRH20103 | Soybean | nucleus | 49.05 | 48.69 |
| Solyc07g005030.2.1 | Tomato | cytosol | 45.85 | 48.5 |
| CDY35811 | Canola | nucleus | 45.97 | 45.52 |
| Bra002293.1-P | Field mustard | nucleus, plastid | 45.97 | 45.52 |
| CDX92469 | Canola | nucleus, plastid | 45.78 | 45.31 |
| AT5G20320.1 | Thale cress | cytosol | 45.11 | 43.07 |
| TraesCS5D01G086900.1 | Wheat | cytosol | 26.71 | 30.98 |
| TraesCS7D01G504300.3 | Wheat | mitochondrion | 6.95 | 30.54 |
| TraesCS7D01G502800.1 | Wheat | mitochondrion, nucleus | 6.83 | 30.16 |
| TraesCS7D01G344100.1 | Wheat | cytosol | 5.72 | 30.1 |
| TraesCS7D01G398600.2 | Wheat | mitochondrion, nucleus | 6.77 | 29.57 |
| TraesCS2D01G479300.1 | Wheat | plastid | 6.28 | 29.48 |
| TraesCS7D01G344200.1 | Wheat | cytosol | 5.66 | 29.39 |
| PGSC0003DMT400019213 | Potato | cytosol, peroxisome, vacuole | 7.14 | 28.71 |
| TraesCS1D01G158000.2 | Wheat | nucleus | 28.12 | 28.07 |
| TraesCS3D01G411200.6 | Wheat | nucleus | 26.65 | 26.5 |
| TraesCS4D01G342300.1 | Wheat | mitochondrion | 28.68 | 23.02 |
Protein Annotations
Description
No Description!
Coordinates
chr2D:-:468774184..468800970
Molecular Weight (calculated)
184094.0 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.243
Length
1625 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGDISTAAAS AGKREPQPKD PRTIARKYQL DLCKRALEEN IIVYLGTGCG KTHIAVLLIY ELGHLIRKPR RDVCIFLAPT VPLVLQQATV IANSTNFRVQ
0101: SYYGDGKTPR DHENWETEMA ESEVLVMTPQ ILLHSLQHCF IKMDSIALLI FDECHHAQVH KRHPYAQIMK GFYNNDMVKP PRIFGMTASP VMGKGGSNKL
0201: NYTKCINSLE ELLHAKVCSV DNAELESVLA FPDMEVHTYV PLSQSNLTVT YNKELDRSKL ESERILRESL YDFKDSQKKL KSLGRLHGNL VFCLQELGSF
0301: GALQAAKAFL LSFDGDVLDR KESDMNDNST RFKHHYLNKA ISVLSSNILD GTHDDSFDLE MVEPFFSNKI MVLINILSRY RLEENMKCIV FVKRITVARA
0401: IAHILQNLKG LDLWKCEFLV GRHSGPKNMS RQKMDAIVEN FSSGEVNLLI ATSVGEEGLD IQTCCLVVRF DLPETVASFI QSRGRARMTN SKYVVLLERG
0501: NHSEEKLLND YIDGEGIMNG EIDLRTSNDV FDHLEEKSYQ VEKTGASIST ACSVSLLHRY CYNLPKDMFF NPSPAFIYID DTEGIICRVI LPPNAAFRQV
0601: DGQPCQSNDE AKRDACLEAL VKLYELGALT DFLLPGSGSR KNKASTTNGS ASNSHDDESL REELHEMLIP TILKPSTCKL DCPLNLHFYY IQFFPIPADR
0701: HYRIFGLFVI NPLPMEAEKL EVDLHLARGR IVKAGMKHLG TISFDEEQMM LARNFQEMFL KVLLDRSEFT VSHVMLLGNS ETLQFNSTFY LLLPIKQELY
0801: GDIFMIDWPT VKRCLSSPVF KDPTGVSAHG SYLPDESLRL LDNMYSKTDV VGSLIFAPHI KTFFVIDVIL NELNARSEYD GATYEDHYKE RFGIKLSHPE
0901: QPLLHAKQLF NLHNLLHDRL RETTEGGREL MEHFVELPPE LCSLKIIGFS KDMCSSLSLL PSLMCRLENL LVAIELKDVM LSSFSEASQI SASGILEALT
1001: TERCLERISL ERFEVLGDAF LKYVVGRHNF LTYEGLDEGQ LTSRRSAIVN NSHLYELSIK RNLQVYIRDQ HFEPTQFIAL GRPCKVVCSA DTEVNIHTDS
1101: RENCNLRCTK SHHWLHRKTI ADAVESLVGA FLVEGGFKAA FAFLHWVGID VDFKDSSLYR VLDASSINLS LTNHTDVDEL EELIGYNFKH KGLILEAFVH
1201: PSFNKHSGGC YQKLEFLGDA VLEYLITSYL YSAYPDLKPG QITDLKSLAV SNNSLAYVAV QKGIHKYLIK DSNYLSTAVN KFENYIRLPN SEKDLVEEPA
1301: CPKVLGDIVE SCVAAVLLDS GFNLNYVWTL VLMLLEPVLS FSDMHMNPMR EIRELCQCHE LELGLPEPMK ADGEYHVKVE VNINSQVISS AAANRNSKVA
1401: RKFAAQETLS KLKNYGYTHK NKSLEEILRD ARKKEPELLG YNEEPIKVEA DISAEMNNLK IGKERDANIS FQNTEISIRG TLRTSSQRTA GNTMFSKDDV
1501: SIERNNQLKV AKQNACLPKG TTQKNIRKEY HGDMVNKTAK SFLFEVCAVS YWKPPEFELC KEEGPSHLRR FTYKVTVQIR GPSETLLECY SDAQLQKKAA
1601: QEHAAQGALW YLRQHGYLPK DEVRV
0101: SYYGDGKTPR DHENWETEMA ESEVLVMTPQ ILLHSLQHCF IKMDSIALLI FDECHHAQVH KRHPYAQIMK GFYNNDMVKP PRIFGMTASP VMGKGGSNKL
0201: NYTKCINSLE ELLHAKVCSV DNAELESVLA FPDMEVHTYV PLSQSNLTVT YNKELDRSKL ESERILRESL YDFKDSQKKL KSLGRLHGNL VFCLQELGSF
0301: GALQAAKAFL LSFDGDVLDR KESDMNDNST RFKHHYLNKA ISVLSSNILD GTHDDSFDLE MVEPFFSNKI MVLINILSRY RLEENMKCIV FVKRITVARA
0401: IAHILQNLKG LDLWKCEFLV GRHSGPKNMS RQKMDAIVEN FSSGEVNLLI ATSVGEEGLD IQTCCLVVRF DLPETVASFI QSRGRARMTN SKYVVLLERG
0501: NHSEEKLLND YIDGEGIMNG EIDLRTSNDV FDHLEEKSYQ VEKTGASIST ACSVSLLHRY CYNLPKDMFF NPSPAFIYID DTEGIICRVI LPPNAAFRQV
0601: DGQPCQSNDE AKRDACLEAL VKLYELGALT DFLLPGSGSR KNKASTTNGS ASNSHDDESL REELHEMLIP TILKPSTCKL DCPLNLHFYY IQFFPIPADR
0701: HYRIFGLFVI NPLPMEAEKL EVDLHLARGR IVKAGMKHLG TISFDEEQMM LARNFQEMFL KVLLDRSEFT VSHVMLLGNS ETLQFNSTFY LLLPIKQELY
0801: GDIFMIDWPT VKRCLSSPVF KDPTGVSAHG SYLPDESLRL LDNMYSKTDV VGSLIFAPHI KTFFVIDVIL NELNARSEYD GATYEDHYKE RFGIKLSHPE
0901: QPLLHAKQLF NLHNLLHDRL RETTEGGREL MEHFVELPPE LCSLKIIGFS KDMCSSLSLL PSLMCRLENL LVAIELKDVM LSSFSEASQI SASGILEALT
1001: TERCLERISL ERFEVLGDAF LKYVVGRHNF LTYEGLDEGQ LTSRRSAIVN NSHLYELSIK RNLQVYIRDQ HFEPTQFIAL GRPCKVVCSA DTEVNIHTDS
1101: RENCNLRCTK SHHWLHRKTI ADAVESLVGA FLVEGGFKAA FAFLHWVGID VDFKDSSLYR VLDASSINLS LTNHTDVDEL EELIGYNFKH KGLILEAFVH
1201: PSFNKHSGGC YQKLEFLGDA VLEYLITSYL YSAYPDLKPG QITDLKSLAV SNNSLAYVAV QKGIHKYLIK DSNYLSTAVN KFENYIRLPN SEKDLVEEPA
1301: CPKVLGDIVE SCVAAVLLDS GFNLNYVWTL VLMLLEPVLS FSDMHMNPMR EIRELCQCHE LELGLPEPMK ADGEYHVKVE VNINSQVISS AAANRNSKVA
1401: RKFAAQETLS KLKNYGYTHK NKSLEEILRD ARKKEPELLG YNEEPIKVEA DISAEMNNLK IGKERDANIS FQNTEISIRG TLRTSSQRTA GNTMFSKDDV
1501: SIERNNQLKV AKQNACLPKG TTQKNIRKEY HGDMVNKTAK SFLFEVCAVS YWKPPEFELC KEEGPSHLRR FTYKVTVQIR GPSETLLECY SDAQLQKKAA
1601: QEHAAQGALW YLRQHGYLPK DEVRV
0001: MRDEVDLSLT IPSKLLGKRD REQKNCEEEK NKNKKAKKQQ KDPILLHTSA ATHKFLPPPL TMPYSEIGDD LRSLDFDHAD VSSDLHLTSS SSVSSFSSSS
0101: SSLFSAAGTD DPSPKMEKDP RKIARRYQVE LCKKATEENV IVYLGTGCGK THIAVMLIYE LGHLVLSPKK SVCIFLAPTV ALVEQQAKVI ADSVNFKVAI
0201: HCGGKRIVKS HSEWEREIAA NEVLVMTPQI LLHNLQHCFI KMECISLLIF DECHHAQQQS NHPYAEIMKV FYKSESLQRP RIFGMTASPV VGKGSFQSEN
0301: LSKSINSLEN LLNAKVYSVE SNVQLDGFVS SPLVKVYYYR SALSDASQST IRYENMLEDI KQRCLASLKL LIDTHQTQTL LSMKRLLKRS HDNLIYTLLN
0401: LGLWGAIQAA KIQLNSDHNV QDEPVGKNPK SKICDTYLSM AAEALSSGVA KDENASDLLS LAALKEPLFS RKLVQLIKIL SVFRLEPHMK CIIFVNRIVT
0501: ARTLSCILNN LELLRSWKSD FLVGLSSGLK SMSRRSMETI LKRFQSKELN LLVATKVGEE GLDIQTCCLV IRYDLPETVT SFIQSRGRAR MPQSEYAFLV
0601: DSGNEKEMDL IENFKVNEDR MNLEITYRSS EETCPRLDEE LYKVHETGAC ISGGSSISLL YKYCSRLPHD EFFQPKPEFQ FKPVDEFGGT ICRITLPANA
0701: PISEIESSLL PSTEAAKKDA CLKAVHELHN LGVLNDFLLP DSKDEIEDEL SDDEFDFDNI KGEGCSRGDL YEMRVPVLFK QKWDPSTSCV NLHSYYIMFV
0801: PHPADRIYKK FGFFMKSPLP VEAETMDIDL HLAHQRSVSV KIFPSGVTEF DNDEIRLAEL FQEIALKVLF ERGELIPDFV PLELQDSSRT SKSTFYLLLP
0901: LCLHDGESVI SVDWVTIRNC LSSPIFKTPS VLVEDIFPPS GSHLKLANGC WNIDDVKNSL VFTTYSKQFY FVADICHGRN GFSPVKESST KSHVESIYKL
1001: YGVELKHPAQ PLLRVKPLCH VRNLLHNRMQ TNLEPQELDE YFIEIPPELS HLKIKGLSKD IGSSLSLLPS IMHRMENLLV AIELKHVLSA SIPEIAEVSG
1101: HRVLEALTTE KCHERLSLER LEVLGDAFLK FAVSRHLFLH HDSLDEGELT RRRSNVVNNS NLCRLAIKKN LQVYIRDQAL DPTQFFAFGH PCRVTCDEVA
1201: SKEVHSLNRD LGILESNTGE IRCSKGHHWL YKKTIADVVE ALVGAFLVDS GFKGAVKFLK WIGVNVDFES LQVQDACIAS RRYLPLTTRN NLETLENQLD
1301: YKFLHKGLLV QAFIHPSYNR HGGGCYQRLE FLGDAVLDYL MTSYFFTVFP KLKPGQLTDL RSLSVNNEAL ANVAVSFSLK RFLFCESIYL HEVIEDYTNF
1401: LASSPLASGQ SEGPRCPKVL GDLVESCLGA LFLDCGFNLN HVWTMMLSFL DPVKNLSNLQ ISPIKELIEL CQSYKWDREI SATKKDGAFT VELKVTKNGC
1501: CLTVSATGRN KREGTKKAAQ LMITNLKAHE NITTSHPLED VLKNGIRNEA KLIGYNEDPI DVVDLVGLDV ENLNILETFG GNSERSSSYV IRRGLPQAPS
1601: KTEDRLPQKA IIKAGGPSSK TAKSLLHETC VANCWKPPHF ECCEEEGPGH LKSFVYKVIL EVEDAPNMTL ECYGEARATK KGAAEHAAQA AIWCLKHSGF
1701: LC
0101: SSLFSAAGTD DPSPKMEKDP RKIARRYQVE LCKKATEENV IVYLGTGCGK THIAVMLIYE LGHLVLSPKK SVCIFLAPTV ALVEQQAKVI ADSVNFKVAI
0201: HCGGKRIVKS HSEWEREIAA NEVLVMTPQI LLHNLQHCFI KMECISLLIF DECHHAQQQS NHPYAEIMKV FYKSESLQRP RIFGMTASPV VGKGSFQSEN
0301: LSKSINSLEN LLNAKVYSVE SNVQLDGFVS SPLVKVYYYR SALSDASQST IRYENMLEDI KQRCLASLKL LIDTHQTQTL LSMKRLLKRS HDNLIYTLLN
0401: LGLWGAIQAA KIQLNSDHNV QDEPVGKNPK SKICDTYLSM AAEALSSGVA KDENASDLLS LAALKEPLFS RKLVQLIKIL SVFRLEPHMK CIIFVNRIVT
0501: ARTLSCILNN LELLRSWKSD FLVGLSSGLK SMSRRSMETI LKRFQSKELN LLVATKVGEE GLDIQTCCLV IRYDLPETVT SFIQSRGRAR MPQSEYAFLV
0601: DSGNEKEMDL IENFKVNEDR MNLEITYRSS EETCPRLDEE LYKVHETGAC ISGGSSISLL YKYCSRLPHD EFFQPKPEFQ FKPVDEFGGT ICRITLPANA
0701: PISEIESSLL PSTEAAKKDA CLKAVHELHN LGVLNDFLLP DSKDEIEDEL SDDEFDFDNI KGEGCSRGDL YEMRVPVLFK QKWDPSTSCV NLHSYYIMFV
0801: PHPADRIYKK FGFFMKSPLP VEAETMDIDL HLAHQRSVSV KIFPSGVTEF DNDEIRLAEL FQEIALKVLF ERGELIPDFV PLELQDSSRT SKSTFYLLLP
0901: LCLHDGESVI SVDWVTIRNC LSSPIFKTPS VLVEDIFPPS GSHLKLANGC WNIDDVKNSL VFTTYSKQFY FVADICHGRN GFSPVKESST KSHVESIYKL
1001: YGVELKHPAQ PLLRVKPLCH VRNLLHNRMQ TNLEPQELDE YFIEIPPELS HLKIKGLSKD IGSSLSLLPS IMHRMENLLV AIELKHVLSA SIPEIAEVSG
1101: HRVLEALTTE KCHERLSLER LEVLGDAFLK FAVSRHLFLH HDSLDEGELT RRRSNVVNNS NLCRLAIKKN LQVYIRDQAL DPTQFFAFGH PCRVTCDEVA
1201: SKEVHSLNRD LGILESNTGE IRCSKGHHWL YKKTIADVVE ALVGAFLVDS GFKGAVKFLK WIGVNVDFES LQVQDACIAS RRYLPLTTRN NLETLENQLD
1301: YKFLHKGLLV QAFIHPSYNR HGGGCYQRLE FLGDAVLDYL MTSYFFTVFP KLKPGQLTDL RSLSVNNEAL ANVAVSFSLK RFLFCESIYL HEVIEDYTNF
1401: LASSPLASGQ SEGPRCPKVL GDLVESCLGA LFLDCGFNLN HVWTMMLSFL DPVKNLSNLQ ISPIKELIEL CQSYKWDREI SATKKDGAFT VELKVTKNGC
1501: CLTVSATGRN KREGTKKAAQ LMITNLKAHE NITTSHPLED VLKNGIRNEA KLIGYNEDPI DVVDLVGLDV ENLNILETFG GNSERSSSYV IRRGLPQAPS
1601: KTEDRLPQKA IIKAGGPSSK TAKSLLHETC VANCWKPPHF ECCEEEGPGH LKSFVYKVIL EVEDAPNMTL ECYGEARATK KGAAEHAAQA AIWCLKHSGF
1701: LC
Arabidopsis Description
DCL4Dicer-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P84634]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.