Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH57881 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G20320.1 | KRH57881 | AT3G62800.1 | 24352449 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20103 | Soybean | nucleus | 95.42 | 95.36 |
| VIT_11s0149g00120.t01 | Wine grape | cytosol | 49.08 | 64.81 |
| Solyc07g005030.2.1 | Tomato | cytosol | 55.2 | 58.79 |
| CDY35811 | Canola | nucleus | 55.38 | 55.21 |
| CDX92469 | Canola | nucleus, plastid | 55.07 | 54.87 |
| Bra002293.1-P | Field mustard | nucleus, plastid | 54.95 | 54.78 |
| AT5G20320.1 | Thale cress | cytosol | 54.95 | 52.82 |
| Zm00001d025830_P011 | Maize | cytosol, nucleus, plasma membrane | 49.14 | 49.97 |
| TraesCS2A01G364700.2 | Wheat | cytosol | 49.02 | 49.41 |
| TraesCS2D01G362700.1 | Wheat | nucleus | 49.02 | 49.35 |
| OQU81938 | Sorghum | mitochondrion | 49.51 | 48.65 |
| GSMUA_Achr9P22460_001 | Banana | cytosol, golgi, nucleus | 40.28 | 48.35 |
| HORVU2Hr1G088270.9 | Barley | endoplasmic reticulum | 48.23 | 48.26 |
| Os04t0509300-02 | Rice | cytosol | 48.47 | 47.86 |
| TraesCS2B01G383300.2 | Wheat | plastid | 49.02 | 46.66 |
| KRH11802 | Soybean | cytosol | 6.42 | 36.84 |
| KRH36818 | Soybean | cytosol, nucleus, plastid | 27.87 | 32.25 |
| KRH36816 | Soybean | cytosol | 27.87 | 32.09 |
| PGSC0003DMT400019213 | Potato | cytosol, peroxisome, vacuole | 7.89 | 31.93 |
| KRH14361 | Soybean | cytosol | 6.3 | 29.86 |
| KRH52276 | Soybean | cytosol | 9.05 | 29.42 |
| KRH61605 | Soybean | nucleus | 29.83 | 29.15 |
| KRG97157 | Soybean | cytosol, nucleus, plasma membrane | 12.35 | 25.63 |
| KRG97266 | Soybean | cytosol, nucleus, plastid | 28.12 | 23.65 |
| KRH68982 | Soybean | cytosol, nucleus, plastid | 28.12 | 23.63 |
Protein Annotations
| Gene3D:1.10.1520.10 | EntrezGene:100818702 | MapMan:16.10.1.3 | MapMan:16.10.1.4.2 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 |
| Gene3D:3.30.160.380 | Gene3D:3.40.50.300 | EMBL:ACUP02010352 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom |
| EnsemblPlantsGene:GLYMA_17G104100 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004525 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006396 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016442 | GO:GO:0016787 | GO:GO:0016891 |
| GO:GO:0030422 | GO:GO:0031047 | GO:GO:0040029 | GO:GO:0090501 | GO:GO:0090502 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 | InterPro:IPR003100 | InterPro:IPR005034 | InterPro:IPR014001 |
| InterPro:IPR014720 | InterPro:IPR036389 | InterPro:IPR038248 | UniProt:K7MKZ2 | EnsemblPlants:KRH03544 | ProteinID:KRH03544 |
| ProteinID:KRH03544.1 | InterPro:P-loop_NTPase | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF00270 | PFAM:PF00271 |
| PFAM:PF00636 | PFAM:PF02170 | PFAM:PF03368 | PFAM:PF14709 | ScanProsite:PS00517 | PFscan:PS50137 |
| PFscan:PS50142 | PFscan:PS50821 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51327 | PANTHER:PTHR14950 |
| PANTHER:PTHR14950:SF15 | InterPro:RNase_III_dom | InterPro:RNase_III_sf | SMART:SM00358 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM00535 | SMART:SM00949 | SUPFAM:SSF101690 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | SUPFAM:SSF69065 |
| UniParc:UPI000233EAEC | InterPro:dsRBD_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:8160933..8182929
Molecular Weight (calculated)
184058.0 Da
IEP (calculated)
6.734
GRAVY (calculated)
-0.203
Length
1636 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPDGESSVVV AGGQASMEPS LSVSNQLQSL SLSQDKNHDD SVKKDPRKIA RKYQLELCKK AMEENIIVYL GTGCGKTHIA VLLMYGMGHL IRKPQKNICV
0101: FLAPTVALVH QQAKVIADST NFKVGTYCGS SKRLKRHQDW EQEIGQYEVL VMTPQILLHN LSHCFITMEM IALLIFDECH HAQVKSNHAY AVIMKVFYKS
0201: NSSKVPRIFG MTASPVVGKG ASSEANLAKS INSLEHILDA KVYSVEDKEL QSFVTTPVIN IYHYVSTASG ETSLYLKIEE IKRQCIANLG RSIEDHQKRM
0301: NAKKLLNRMH DNVIFGLQNL GIWGALQASH ILLSGDRSER HELVEAEGNS SDDSLCDKYL AQAAELFTSQ CMIGDRVTDL SSVEILKEPF FSAKLLRLIG
0401: ILSNFRLQKN MKCIIFVNRI VTARSLSYIL QKLKLLRQWR SDFLVGVHAG LKSMSRKTMN IIVDKFRSGE LNLLVATKVG EEGLDIQTCC LVIRFDLPET
0501: VASFIQSRGR ARMPQSEYAF LVDSGNKKEL DIIDGFEKDE YRMNMEITFR TSKETYIIPE ERIFRVDSSG ASVSSGYSIS LLHQYCSKLP HDEYFDPKPC
0601: FYYLDDSGGI SCHITLPSNA PINQILGTPQ LSMEASKRDA CLKAIEELYN LGTLSDCLLP KQDDAEPEAQ VSGSSDEDEC EDAISRGELH EMLVPSAFGQ
0701: SWINEDNIVR LNSYYIKFCP YPEDRVYKEF GLFIMVRLPM EAEKLELDLH LAHGRSVMTK FVPFGVVEFD KDEIKMAENF QEMFLKIILD RLEFVSEFVD
0801: LGMGAESHTG TSTFYLLLPV VLQEYGNAMK VDWKTVKRCL CSPIFRHPAD TMDKKVFPLD IHLQLANGYR SVRDVENSLV YAPHKKNFYF VTNVNYQKNG
0901: YSPHNDSGTS SYVDYFIEKF SIHLKCPEQP LLHVKPVSNL HNLLHNRKHE DAEPQELDEY LIYLPPELCE LKIIGFSKDI GSSISLLPSI MHRLGNLLVA
1001: IELKHRLSSS FPEAAEISAL RVLEALTTEK CQERFSLERL EVLGDAFLKF AVARHFFLMH DSLHEGDLTK RRSNAVNNSN LFKLAIKRNL QVYICDQTFD
1101: PTQFYALGRP CPRLCSNETK ESIHFCLNSV KEQGKVTETQ CNKNHHWLHR KTIADVVEAL VGAFLVDSGF KAAIAFLSWI GIQVDFEASQ VVDICIASAS
1201: YLPLSSEVDI PSLEGKLGHH FFHKGLLLQA FVHPSYNKLG GGCYQRLEFL GDAVLDYLIT SYVFSAYPKL KPGQLTDLRS LSVNNKAFAC LAVDRSFDKF
1301: LLCDSSGLSE AIKKYVDYIR RPVSDNSIKE GPKCPKALGD LVESCVGAIL LDSGFNLNKV WKIMTSFLDS IMKFSSSLQL SPVRDLRELC QSHNMELEFL
1401: PVPSKLTKRF SVEAKVSGNG VCETASATGQ NKKEACRIAS LLLFSKFKAQ GWKAKSKTLE EVLESTSKME PKLIGYDETP IDVTDTNKHI VVNADPYNKS
1501: NPEIRPMQET DEICSPCVKP FGQRLQSSAK GKLSQIFENR DCSSDLSGTG TARSRLYELC ASYCWKPPSF ECCKAEGPDH LKQFTCKVTL EIEEAQNLIL
1601: EFVGEPLSKK KDAAESAAEG AFWYLQHEGY LPSSGN
0101: FLAPTVALVH QQAKVIADST NFKVGTYCGS SKRLKRHQDW EQEIGQYEVL VMTPQILLHN LSHCFITMEM IALLIFDECH HAQVKSNHAY AVIMKVFYKS
0201: NSSKVPRIFG MTASPVVGKG ASSEANLAKS INSLEHILDA KVYSVEDKEL QSFVTTPVIN IYHYVSTASG ETSLYLKIEE IKRQCIANLG RSIEDHQKRM
0301: NAKKLLNRMH DNVIFGLQNL GIWGALQASH ILLSGDRSER HELVEAEGNS SDDSLCDKYL AQAAELFTSQ CMIGDRVTDL SSVEILKEPF FSAKLLRLIG
0401: ILSNFRLQKN MKCIIFVNRI VTARSLSYIL QKLKLLRQWR SDFLVGVHAG LKSMSRKTMN IIVDKFRSGE LNLLVATKVG EEGLDIQTCC LVIRFDLPET
0501: VASFIQSRGR ARMPQSEYAF LVDSGNKKEL DIIDGFEKDE YRMNMEITFR TSKETYIIPE ERIFRVDSSG ASVSSGYSIS LLHQYCSKLP HDEYFDPKPC
0601: FYYLDDSGGI SCHITLPSNA PINQILGTPQ LSMEASKRDA CLKAIEELYN LGTLSDCLLP KQDDAEPEAQ VSGSSDEDEC EDAISRGELH EMLVPSAFGQ
0701: SWINEDNIVR LNSYYIKFCP YPEDRVYKEF GLFIMVRLPM EAEKLELDLH LAHGRSVMTK FVPFGVVEFD KDEIKMAENF QEMFLKIILD RLEFVSEFVD
0801: LGMGAESHTG TSTFYLLLPV VLQEYGNAMK VDWKTVKRCL CSPIFRHPAD TMDKKVFPLD IHLQLANGYR SVRDVENSLV YAPHKKNFYF VTNVNYQKNG
0901: YSPHNDSGTS SYVDYFIEKF SIHLKCPEQP LLHVKPVSNL HNLLHNRKHE DAEPQELDEY LIYLPPELCE LKIIGFSKDI GSSISLLPSI MHRLGNLLVA
1001: IELKHRLSSS FPEAAEISAL RVLEALTTEK CQERFSLERL EVLGDAFLKF AVARHFFLMH DSLHEGDLTK RRSNAVNNSN LFKLAIKRNL QVYICDQTFD
1101: PTQFYALGRP CPRLCSNETK ESIHFCLNSV KEQGKVTETQ CNKNHHWLHR KTIADVVEAL VGAFLVDSGF KAAIAFLSWI GIQVDFEASQ VVDICIASAS
1201: YLPLSSEVDI PSLEGKLGHH FFHKGLLLQA FVHPSYNKLG GGCYQRLEFL GDAVLDYLIT SYVFSAYPKL KPGQLTDLRS LSVNNKAFAC LAVDRSFDKF
1301: LLCDSSGLSE AIKKYVDYIR RPVSDNSIKE GPKCPKALGD LVESCVGAIL LDSGFNLNKV WKIMTSFLDS IMKFSSSLQL SPVRDLRELC QSHNMELEFL
1401: PVPSKLTKRF SVEAKVSGNG VCETASATGQ NKKEACRIAS LLLFSKFKAQ GWKAKSKTLE EVLESTSKME PKLIGYDETP IDVTDTNKHI VVNADPYNKS
1501: NPEIRPMQET DEICSPCVKP FGQRLQSSAK GKLSQIFENR DCSSDLSGTG TARSRLYELC ASYCWKPPSF ECCKAEGPDH LKQFTCKVTL EIEEAQNLIL
1601: EFVGEPLSKK KDAAESAAEG AFWYLQHEGY LPSSGN
0001: MRDEVDLSLT IPSKLLGKRD REQKNCEEEK NKNKKAKKQQ KDPILLHTSA ATHKFLPPPL TMPYSEIGDD LRSLDFDHAD VSSDLHLTSS SSVSSFSSSS
0101: SSLFSAAGTD DPSPKMEKDP RKIARRYQVE LCKKATEENV IVYLGTGCGK THIAVMLIYE LGHLVLSPKK SVCIFLAPTV ALVEQQAKVI ADSVNFKVAI
0201: HCGGKRIVKS HSEWEREIAA NEVLVMTPQI LLHNLQHCFI KMECISLLIF DECHHAQQQS NHPYAEIMKV FYKSESLQRP RIFGMTASPV VGKGSFQSEN
0301: LSKSINSLEN LLNAKVYSVE SNVQLDGFVS SPLVKVYYYR SALSDASQST IRYENMLEDI KQRCLASLKL LIDTHQTQTL LSMKRLLKRS HDNLIYTLLN
0401: LGLWGAIQAA KIQLNSDHNV QDEPVGKNPK SKICDTYLSM AAEALSSGVA KDENASDLLS LAALKEPLFS RKLVQLIKIL SVFRLEPHMK CIIFVNRIVT
0501: ARTLSCILNN LELLRSWKSD FLVGLSSGLK SMSRRSMETI LKRFQSKELN LLVATKVGEE GLDIQTCCLV IRYDLPETVT SFIQSRGRAR MPQSEYAFLV
0601: DSGNEKEMDL IENFKVNEDR MNLEITYRSS EETCPRLDEE LYKVHETGAC ISGGSSISLL YKYCSRLPHD EFFQPKPEFQ FKPVDEFGGT ICRITLPANA
0701: PISEIESSLL PSTEAAKKDA CLKAVHELHN LGVLNDFLLP DSKDEIEDEL SDDEFDFDNI KGEGCSRGDL YEMRVPVLFK QKWDPSTSCV NLHSYYIMFV
0801: PHPADRIYKK FGFFMKSPLP VEAETMDIDL HLAHQRSVSV KIFPSGVTEF DNDEIRLAEL FQEIALKVLF ERGELIPDFV PLELQDSSRT SKSTFYLLLP
0901: LCLHDGESVI SVDWVTIRNC LSSPIFKTPS VLVEDIFPPS GSHLKLANGC WNIDDVKNSL VFTTYSKQFY FVADICHGRN GFSPVKESST KSHVESIYKL
1001: YGVELKHPAQ PLLRVKPLCH VRNLLHNRMQ TNLEPQELDE YFIEIPPELS HLKIKGLSKD IGSSLSLLPS IMHRMENLLV AIELKHVLSA SIPEIAEVSG
1101: HRVLEALTTE KCHERLSLER LEVLGDAFLK FAVSRHLFLH HDSLDEGELT RRRSNVVNNS NLCRLAIKKN LQVYIRDQAL DPTQFFAFGH PCRVTCDEVA
1201: SKEVHSLNRD LGILESNTGE IRCSKGHHWL YKKTIADVVE ALVGAFLVDS GFKGAVKFLK WIGVNVDFES LQVQDACIAS RRYLPLTTRN NLETLENQLD
1301: YKFLHKGLLV QAFIHPSYNR HGGGCYQRLE FLGDAVLDYL MTSYFFTVFP KLKPGQLTDL RSLSVNNEAL ANVAVSFSLK RFLFCESIYL HEVIEDYTNF
1401: LASSPLASGQ SEGPRCPKVL GDLVESCLGA LFLDCGFNLN HVWTMMLSFL DPVKNLSNLQ ISPIKELIEL CQSYKWDREI SATKKDGAFT VELKVTKNGC
1501: CLTVSATGRN KREGTKKAAQ LMITNLKAHE NITTSHPLED VLKNGIRNEA KLIGYNEDPI DVVDLVGLDV ENLNILETFG GNSERSSSYV IRRGLPQAPS
1601: KTEDRLPQKA IIKAGGPSSK TAKSLLHETC VANCWKPPHF ECCEEEGPGH LKSFVYKVIL EVEDAPNMTL ECYGEARATK KGAAEHAAQA AIWCLKHSGF
1701: LC
0101: SSLFSAAGTD DPSPKMEKDP RKIARRYQVE LCKKATEENV IVYLGTGCGK THIAVMLIYE LGHLVLSPKK SVCIFLAPTV ALVEQQAKVI ADSVNFKVAI
0201: HCGGKRIVKS HSEWEREIAA NEVLVMTPQI LLHNLQHCFI KMECISLLIF DECHHAQQQS NHPYAEIMKV FYKSESLQRP RIFGMTASPV VGKGSFQSEN
0301: LSKSINSLEN LLNAKVYSVE SNVQLDGFVS SPLVKVYYYR SALSDASQST IRYENMLEDI KQRCLASLKL LIDTHQTQTL LSMKRLLKRS HDNLIYTLLN
0401: LGLWGAIQAA KIQLNSDHNV QDEPVGKNPK SKICDTYLSM AAEALSSGVA KDENASDLLS LAALKEPLFS RKLVQLIKIL SVFRLEPHMK CIIFVNRIVT
0501: ARTLSCILNN LELLRSWKSD FLVGLSSGLK SMSRRSMETI LKRFQSKELN LLVATKVGEE GLDIQTCCLV IRYDLPETVT SFIQSRGRAR MPQSEYAFLV
0601: DSGNEKEMDL IENFKVNEDR MNLEITYRSS EETCPRLDEE LYKVHETGAC ISGGSSISLL YKYCSRLPHD EFFQPKPEFQ FKPVDEFGGT ICRITLPANA
0701: PISEIESSLL PSTEAAKKDA CLKAVHELHN LGVLNDFLLP DSKDEIEDEL SDDEFDFDNI KGEGCSRGDL YEMRVPVLFK QKWDPSTSCV NLHSYYIMFV
0801: PHPADRIYKK FGFFMKSPLP VEAETMDIDL HLAHQRSVSV KIFPSGVTEF DNDEIRLAEL FQEIALKVLF ERGELIPDFV PLELQDSSRT SKSTFYLLLP
0901: LCLHDGESVI SVDWVTIRNC LSSPIFKTPS VLVEDIFPPS GSHLKLANGC WNIDDVKNSL VFTTYSKQFY FVADICHGRN GFSPVKESST KSHVESIYKL
1001: YGVELKHPAQ PLLRVKPLCH VRNLLHNRMQ TNLEPQELDE YFIEIPPELS HLKIKGLSKD IGSSLSLLPS IMHRMENLLV AIELKHVLSA SIPEIAEVSG
1101: HRVLEALTTE KCHERLSLER LEVLGDAFLK FAVSRHLFLH HDSLDEGELT RRRSNVVNNS NLCRLAIKKN LQVYIRDQAL DPTQFFAFGH PCRVTCDEVA
1201: SKEVHSLNRD LGILESNTGE IRCSKGHHWL YKKTIADVVE ALVGAFLVDS GFKGAVKFLK WIGVNVDFES LQVQDACIAS RRYLPLTTRN NLETLENQLD
1301: YKFLHKGLLV QAFIHPSYNR HGGGCYQRLE FLGDAVLDYL MTSYFFTVFP KLKPGQLTDL RSLSVNNEAL ANVAVSFSLK RFLFCESIYL HEVIEDYTNF
1401: LASSPLASGQ SEGPRCPKVL GDLVESCLGA LFLDCGFNLN HVWTMMLSFL DPVKNLSNLQ ISPIKELIEL CQSYKWDREI SATKKDGAFT VELKVTKNGC
1501: CLTVSATGRN KREGTKKAAQ LMITNLKAHE NITTSHPLED VLKNGIRNEA KLIGYNEDPI DVVDLVGLDV ENLNILETFG GNSERSSSYV IRRGLPQAPS
1601: KTEDRLPQKA IIKAGGPSSK TAKSLLHETC VANCWKPPHF ECCEEEGPGH LKSFVYKVIL EVEDAPNMTL ECYGEARATK KGAAEHAAQA AIWCLKHSGF
1701: LC
Arabidopsis Description
DCL4Dicer-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P84634]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.